Gene Information

Name : Trad_1778 (Trad_1778)
Accession : YP_003705439.1
Strain : Truepera radiovictrix DSM 17093
Genome accession: NC_014221
Putative virulence/resistance : Unknown
Product : PilT domain-containing protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3744
EC number : -
Position : 1912499 - 1912876 bp
Length : 378 bp
Strand : +
Note : COGs: COG3744 conserved hypothetical protein; InterPro IPR002716; KEGG: ypi:YpsIP31758_3737 PilT domain-containing protein; PFAM: PilT protein domain protein; SPTR: A7FN63 PIN domain protein; PFAM: PIN domain

DNA sequence :
ATGAAGCTCCTACTTGATACGCATGTCCTCATCTGGGTGTTTGATGGTAGCGCGGACCTAGCCACAACGGCCAAAGAGGT
GATCGCAGATGGAAGAAACGAGGTGTTCGTCAGTGCCGTCACGGCGTGGGAAATTGCGATCAAACGCAGCTTGGGCAAGC
TCGAGCTACGCGGTGATTATCAGCGCGGCCTGACGCTCTACCGCTTTACCCCCCTAGCCATCAGCACCGAACACGCGCTC
GCAACCGAGACCTTGCCGCCCCACCACGCCGACCCCTTCGACCGGCTTCTCATCGCTCAGGCGACCCTAGAGGGCCTGAC
CATCATCTCCCGTGACGCGCGGTTTGCCGACTACGGCGTAGAACTCATCAAGGCGTAG

Protein sequence :
MKLLLDTHVLIWVFDGSADLATTAKEVIADGRNEVFVSAVTAWEIAIKRSLGKLELRGDYQRGLTLYRFTPLAISTEHAL
ATETLPPHHADPFDRLLIAQATLEGLTIISRDARFADYGVELIKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api10 CAF28484.1 hypothetical protein Not tested YAPI Protein 1e-26 48
YpsIP31758_3737 YP_001402691.1 PilT domain-containing protein Not tested YAPI Protein 2e-26 48
unnamed AAK08021.1 unknown Not tested exl Protein 5e-18 41
unnamed AAK08032.1 unknown Not tested exl Protein 2e-14 41