|
Name : Trad_1737 (Trad_1737) Accession : YP_003705398.1 Strain : Truepera radiovictrix DSM 17093 Genome accession: NC_014221 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4175 EC number : - Position : 1873192 - 1874211 bp Length : 1020 bp Strand : + Note : COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component; InterPro IPR017871:IPR003439:IPR000644:IPR003593; KEGG: bcv:Bcav_1227 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain co DNA sequence : ATGATGGCTAAGCCGATCGTCTTAGAGGGGGTCTCTAAGCTCTACGCGCCGCGGCCCGCGCAGGCCCTCAGGCGTTTCTA CAGCTCGGGGCGCCTGCAACCGGGGGAGCACCTCGGCGTCCTAGGCGTCTCGCTCCACGTCGAACCGGGCGAGACGTTCG TCCTGATGGGGCACTCGGGCTCCGGCAAGTCGACCTTGCTGCGCCTTTTAAACGGCCTCTACCGCCCCACCGCCGGGCGC GTGACGGTGATGGGGACCGACCTCGGGCAGCTTAACCGAACGCAGCTCGTGCGCTTGCGCCGCCGCGTGTTCTGCGGGAT GGTCTTTCAGGGGTTTGCGCTGCTGCCCCACCGCAGCGCGCTCGAGAACGTCGCGTTCGGTCTCGAGCTCCAGGGGGTGC CGCGGCCGGTGCGGCTAGAGCGCGCCCGCGAGGCGCTCGCTTTGGTCGGCCTAGGAGAGCGCGAGCGGGCGCTGCCCGCC GCGCTCTCCGGCGGGCAGCAGCAGCGCCTCGGGCTCGCCCGCGCGCTCGTCATGGACGGCGACGTACTGCTCATGGACGA ACCCTTTAGCGCGCTCGACCCCGTCACCCGCCGCGAACTCCAGGGCGAGCTGCTGCGGCTGCGCGCGCGCGTGCGCAAGA CCATCGTCTTCGTCACCCACGACCTGAGCGAAGCGCTCCGCTTAGGCGACCGCATCGCGCTCCTCAAGGAGGGGCGGGTG CAGCAGATCGGCCGCCCCGAGGAGATCGTGGCGAAACCGGCCAACGCCTACGTCGCCGACTTCGTCGCGGGGGCCGACCG GCAGGCGGTGCTGCGCGCGCGCAGCATCATGACCCCTCCGGAGGCGGTGGGCGGCGCCGCGCTCGCCGGAGCCCGCACCG TCGCCGCCGACGCCCCCCTCTCGGAGGTCGCCCGCTTGGCCGCGACGGGCGGCGTCCTCTCGGTCGTCGGCGACGCCGGG CAGCCGCTCGGCGTGATCACGCAGCGCGACGTGCTGCTCGCGCTCGCGGGGGGCGCGTGA Protein sequence : MMAKPIVLEGVSKLYAPRPAQALRRFYSSGRLQPGEHLGVLGVSLHVEPGETFVLMGHSGSGKSTLLRLLNGLYRPTAGR VTVMGTDLGQLNRTQLVRLRRRVFCGMVFQGFALLPHRSALENVAFGLELQGVPRPVRLERAREALALVGLGERERALPA ALSGGQQQRLGLARALVMDGDVLLMDEPFSALDPVTRRELQGELLRLRARVRKTIVFVTHDLSEALRLGDRIALLKEGRV QQIGRPEEIVAKPANAYVADFVAGADRQAVLRARSIMTPPEAVGGAALAGARTVAADAPLSEVARLAATGGVLSVVGDAG QPLGVITQRDVLLALAGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-34 | 44 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 4e-35 | 44 |
