|
Name : Trad_1586 (Trad_1586) Accession : YP_003705248.1 Strain : Truepera radiovictrix DSM 17093 Genome accession: NC_014221 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1703076 - 1703507 bp Length : 432 bp Strand : - Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR020081:IPR000037; KEGG: ddr:Deide_08770 putative SsrA-binding protein; PFAM: SmpB protein; SPTR: C1D1M8 Putative SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-bindin DNA sequence : ATGATCCAGAACCGCCGTGCAAGCTTCGATTACGAGCTTTTAGAACGTTTTGAAGCGGGGCTCGTGCTTACAGGTAGCGA GGTCAAAGCGCTGCGCCAAGGGGGGGTGACGTTGGGGGAGGCGTATGCCCGCGTCCGCGGGGGGGAGGTGTGGCTCGAGG GCCTCTACATCCCCCCTTACAAAGAGGCGAGCTACAACAACCACGAACCGCGGCGCCCCCGCAAGCTGCTCCTTAGAGCG CGCGAGATCGCCGAGGTCCAGCGCGCCCTGGAGCGCAAGGGGCTCACGCTGGTGCCGACGAAGCTCTACTTCAAAAACGG CTGGGCGAAGCTCGAGGTGGCCCTGGGGCGTGGCAAAAAGCGTTTCGACAAACGCCAAGACGCCGCCAAACGCGACGCGC AGCGCCAGATCGAGCGGGCGCTCAAACGGTGA Protein sequence : MIQNRRASFDYELLERFEAGLVLTGSEVKALRQGGVTLGEAYARVRGGEVWLEGLYIPPYKEASYNNHEPRRPRKLLLRA REIAEVQRALERKGLTLVPTKLYFKNGWAKLEVALGRGKKRFDKRQDAAKRDAQRQIERALKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 8e-24 | 49 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 6e-21 | 41 |
