Gene Information

Name : Trad_1538 (Trad_1538)
Accession : YP_003705200.1
Strain : Truepera radiovictrix DSM 17093
Genome accession: NC_014221
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1643233 - 1644753 bp
Length : 1521 bp
Strand : -
Note : COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160:IPR015590:IPR016162:IPR016161; KEGG: xac:XAC0129 chloroacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: A6CTM5 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehyd

DNA sequence :
ATGATCCAGGATGTCGAGAGCCGCGTTTCCCCCCCCGTCACCTTTAAAAAGCGTTACGACAACTTTATCGGGGGCGAGTT
CGTCCCCCCCGCGAAGGGCCAGTACTTCGAGAACCCGACCCCGATCACCGGCCAGGTGTTCTGCGAAGTGGCGCGTTCGA
CCGCCGAGGATGTCGAGCGGGCCCTCGACGCGGCGCACGCCGCGAAGGGCGCCTGGGGCAAGACCTCGGTCGCCGAACGC
GCTGCGGTGCTCCTCAAGATCGCCGAACGCCTCGAGGAGAACCTCGAGACGCTCGCCAAGATCGAGACCTGGGACAACGG
TAAACCGATCCGCGAGGCGCTCGCGGCCGACCTGCCCCTGGCCATCGACCACTTCCGCTACTTCGCCGGTGCGATTCGCG
CCCAAGAGGGGGGGATCAGCCAGATCGACGACGACACCGTGGCGTACCACTTCCACGAACCGATCGGCGTGGTCGGGCAG
ATCATCCCCTGGAACTTCCCCATCTTGATGGCCGCCTGGAAGCTCGCGCCGGCGCTCGCGGCGGGTAACTGCGTCGTCAT
CAAACCCGCCGAGCAGACGCCCGTGGGCATCATGCACGTCGCCGAACTCGTCGCCGACCTCCTCCCCGCCGGGGTCCTCA
ACATCGTGCAGGGCTTTGGCGTCGAGGCCGGCAAACCGCTGGCGAGCTCCCCGCGCGTCGGCAAGGTCGCCTTTACGGGG
GAGACCACCACGGGCCGCTTGATCATGCAGTACGCCTCGGAAAACCTCATCCCGGTGACCTTGGAGCTCGGCGGCAAGTC
GCCGAACATCTTTTTCGAGGACGTCATGCGCGAGGATGACGCCTTCTTCGACAAGTGCTTGGAGGGCTTTGCGATGTTCG
CCCTTAACCAGGGCGAGGTCTGCACCTGCCCCTCGCGGGCGCTCATCCAAAAGAGCATCTACGACGCCTTTATGGAGCGG
GCGCTGGCGCGCGTCGAGAAGATCCGCCCCGGCAACCCCCTGGACCCCAACACGGTGCTCGGCGCGCAGGCTTCGAACGA
CCAGCTCGAGAAGATCCTCTCGTACCTCGACATCGGCAAACAAGAGGGCGCCAAGGTGCTCGCCGGCGGTGAGCGCGCGA
CGCTCGAGGGCGACCTCGAGGGGGGCTACTACGTCGAACCCACCGTCTTCGAGGGGCACAACCAGATGCGCATCTTCCAG
GAGGAGATCTTCGGCCCGGTCGTCTCGGTGACCGCCTTCGAAGACGAGGCCGAAGCGCTCGAGATCGCCAACGACACCCT
CTACGGCCTCGGCGCCGGGGTGTGGAGCCGCGACGCCAACACCTGCTACCGGATGGGGCGGGGGATCCAGGCGGGGCGCG
TGTGGGTGAACAACTACCACGCCTACCCCGCACACGCGGCCTTCGGCGGTTACAAGCAGTCGGGCGTCGGGCGCGAAACC
CACAAGATGATGCTCGCGCACTACCAGCAGACGAAGAACCTGCTGGTCTCCTATAGCGAGCAGCCGCTCGGCTTTTTCTA
G

Protein sequence :
MIQDVESRVSPPVTFKKRYDNFIGGEFVPPAKGQYFENPTPITGQVFCEVARSTAEDVERALDAAHAAKGAWGKTSVAER
AAVLLKIAERLEENLETLAKIETWDNGKPIREALAADLPLAIDHFRYFAGAIRAQEGGISQIDDDTVAYHFHEPIGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVIKPAEQTPVGIMHVAELVADLLPAGVLNIVQGFGVEAGKPLASSPRVGKVAFTG
ETTTGRLIMQYASENLIPVTLELGGKSPNIFFEDVMREDDAFFDKCLEGFAMFALNQGEVCTCPSRALIQKSIYDAFMER
ALARVEKIRPGNPLDPNTVLGAQASNDQLEKILSYLDIGKQEGAKVLAGGERATLEGDLEGGYYVEPTVFEGHNQMRIFQ
EEIFGPVVSVTAFEDEAEALEIANDTLYGLGAGVWSRDANTCYRMGRGIQAGRVWVNNYHAYPAHAAFGGYKQSGVGRET
HKMMLAHYQQTKNLLVSYSEQPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-147 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-153 62
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-153 62
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-153 62
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-152 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Trad_1538 YP_003705200.1 aldehyde dehydrogenase VFG0082 Protein 8e-148 63