Gene Information

Name : Trad_1487 (Trad_1487)
Accession : YP_003705151.1
Strain : Truepera radiovictrix DSM 17093
Genome accession: NC_014221
Putative virulence/resistance : Unknown
Product : LacI family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1609
EC number : -
Position : 1590953 - 1591999 bp
Length : 1047 bp
Strand : +
Note : COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: cai:Caci_4997 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory prot

DNA sequence :
ATGAGTGCTAGTGCCTCGCACCCCCCCAAAGCCGTCACGCTCAACGACGTCGCGCGCGCCGCCGGCGTCTCGCACCAGAC
CGTCTCGCGGGTCATCAACGAGCACCCTAGCGTCGCCCCGGCGACGCGCGCGCGGGTGCTCGCCGCCATTCGCGAGCTCG
GCTACCGGCCGAACGCGCTCGCGCGCAAGCTCGTCACGGGGCGCTCCAAAACGGTCGGCATCGTGGGTTTCGGCACCACC
TTCTACGGCCCCGCGCAGATGGTCTTAAGCGTCGAGCGGGCGCTCAAGGGGCGCGGCTACGGGTTTGCGCTGGCCTCGGT
CGACGACCTCGAGCGCCCCAGCTTGGAGGGTGCGGTGCGCGAGCTAGGGCGCCACGACGTCGAGGGGCTGATTTTAATCA
CGCCGCTGCGCGAGGTGAGCCTCGCGGAGATCGACGCCCTTTGCGGCGGGCGGCCCTTCGTGATGATCGACGTCGCCAAG
GGGAGCCCGCTCCCGTCGGTGGTCATCGACCAAGGGCACGGCAGCGCGCTCGCGACCCGGCACCTCGTGGACCTCGGGCA
CCACCATGTGGCCGAGATCAGCGGGCCGCTCGCGTGGCACGACGCCTGGGCGCGCCACGAAGCGTGGCGCGAGACGCTTC
TCAAGGCCGGGCTGACGCCGGGGCGGAGCGTCGAGGGCGACTGGACCGCTGAGGGGGGCTACCGCGCCGCGGAGGCGCTG
CTGAGCTCGGGGGAGCGCTTTACGGCGCTCGTCGTGGGCAACGACCAGATGGCGCTGGGCGCCCTGGCAGCGCTCTCCGA
GCGCGGGGTGCGGGTGCCCGAGGAGGTCTCGGTGGTCGGTTTCGACGACGTGCCGGAGGCGCGCTTTTACCGCCCCCCCT
TGACGACCGTCCGGCAGGACTTCGCGGAGCTGGGTACGCGGAGCGCCGCGTTGATCCTCAAGGCCATCGAGGCGCGCCGG
GCGCCGCAGCTGCCGCCCCGACCCGAGCAGGTGTGTTTGACGCCCGAGCTGGTGGTGCGCCTGAGCACCGCGCCCCCACC
GCGCTGA

Protein sequence :
MSASASHPPKAVTLNDVARAAGVSHQTVSRVINEHPSVAPATRARVLAAIRELGYRPNALARKLVTGRSKTVGIVGFGTT
FYGPAQMVLSVERALKGRGYGFALASVDDLERPSLEGAVRELGRHDVEGLILITPLREVSLAEIDALCGGRPFVMIDVAK
GSPLPSVVIDQGHGSALATRHLVDLGHHHVAEISGPLAWHDAWARHEAWRETLLKAGLTPGRSVEGDWTAEGGYRAAEAL
LSSGERFTALVVGNDQMALGALAALSERGVRVPEEVSVVGFDDVPEARFYRPPLTTVRQDFAELGTRSAALILKAIEARR
APQLPPRPEQVCLTPELVVRLSTAPPPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0036 YP_001220775.1 LacI family transcriptional regulator Not tested chp/tomA region Protein 3e-50 43