Gene Information

Name : Slip_0870 (Slip_0870)
Accession : YP_003702215.1
Strain : Syntrophothermus lipocalidus DSM 12680
Genome accession: NC_014220
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : 2.5.1.9
Position : 904710 - 905339 bp
Length : 630 bp
Strand : +
Note : COGs: COG0307 riboflavin synthase alpha chain; InterPro IPR017938:IPR001783; KEGG: swo:Swol_1221 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: riboflavin synthase; SPTR: Q8GDW2 riboflavin synthase alpha chain (Fragment); TIGRFA

DNA sequence : 
GTGGGAACAATAAGAGAAGTGAGAAAAAGCAGTTTTTCGTGTCAACTTGTCATCAAAGCCGAACAGGTCTTGGGAGATGT
AAAGTTAGGAGACAGCATAGCCGTTAACGGGGTTTGCCTGACCGTAATCGATTTTGACCGTGACCAGTTCGTGGCTGATG
TTATGTTTGAGACTTTGAAAAAGACAACCCTTGGTTACCTGAGGAGCGGGGAAAAAGTCAACCTGGAAAGAGCTTTGCGC
CTTTCCGATCGACTGGGTGGCCACATCGTACTGGGACATGTTGATGGAGTTGGAAGGATAAAGGAACAAACCAAAGTCGA
TATTTCGGTTGTTACGAGGATTAGCGCTTCGCCCGATATCTTGCGTTATGTGATTCCAAGGGGTTCGATTGCGGTAGACG
GGATAAGCTTGACGGTGGTGGAGGTGTGGCCTGATAGTTTTAGTGTTTCTCTAATACCTCATACCGCCGAAAAGACGACG
CTAGGCTTCAAGAAGCCGGGGGACTATGTGAACCTTGAGGCAGACATAATCGGGAGGTACGTGGAAAGGCTGTCATGTTC
GGGAGACAGGAGCTCTAAGGATGGCTCGGTAGATATTGATTTCCTGCGGGAACACGGCTTCGCTACATAG

Protein sequence : 
MGTIREVRKSSFSCQLVIKAEQVLGDVKLGDSIAVNGVCLTVIDFDRDQFVADVMFETLKKTTLGYLRSGEKVNLERALR
LSDRLGGHIVLGHVDGVGRIKEQTKVDISVVTRISASPDILRYVIPRGSIAVDGISLTVVEVWPDSFSVSLIPHTAEKTT
LGFKKPGDYVNLEADIIGRYVERLSCSGDRSSKDGSVDIDFLREHGFAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 2e-33 41
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 2e-33 41