Gene Information

Name : Slip_0799 (Slip_0799)
Accession : YP_003702144.1
Strain : Syntrophothermus lipocalidus DSM 12680
Genome accession: NC_014220
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 833544 - 833903 bp
Length : 360 bp
Strand : +
Note : InterPro IPR001845:IPR018334:IPR011991; KEGG: swo:Swol_2087 transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Q0AV75 transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family

DNA sequence : 
GTGGTGCGAGAATCAATAGAGTTTTGCGAATGCGATTGTATTCATGAAGACACGGTAAGGAAAGTACGGAGCGAGATGAT
AACCGAGGAGGTAAGCCACGCGCTAGCAGAAGTCTTCAGGGCTTTGGGAGATCCCACGAGGGTCAAATTGCTTTACGCGC
TGTCAAGAAGGGAATTGTGTGTGTGCGATTTGGCGGCGGTGATCGGCGCGTCCGAGTCCGCTGTTTCTCATCAACTGAGG
CTTCTGCGCACCCAGAAGCTGGTCCGGTTTCGCCGGGAGGGAAAAGTAGTCTATTACTCGCTGGCAGACAAACATGTGGA
AAAGCTTTTCCAGCAAGGGTTGGAACACGTCACCGAGTGA

Protein sequence : 
MVRESIEFCECDCIHEDTVRKVRSEMITEEVSHALAEVFRALGDPTRVKLLYALSRRELCVCDLAAVIGASESAVSHQLR
LLRTQKLVRFRREGKVVYYSLADKHVEKLFQQGLEHVTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 2e-21 45
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 2e-21 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Slip_0799 YP_003702144.1 ArsR family transcriptional regulator BAC0456 Protein 9e-27 50
Slip_0799 YP_003702144.1 ArsR family transcriptional regulator BAC0366 Protein 1e-18 49