Gene Information

Name : Slip_0007 (Slip_0007)
Accession : YP_003701380.1
Strain : Syntrophothermus lipocalidus DSM 12680
Genome accession: NC_014220
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 8701 - 9585 bp
Length : 885 bp
Strand : +
Note : COGs: COG0214 pyridoxine biosynthesis enzyme; InterPro IPR001852:IPR011060; KEGG: mta:Moth_0009 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; SPTR: Q2RMJ0 Vitamin B6 biosynthesis protein; TIGRFAM: pyridoxine biosynthesis protei

DNA sequence : 
ATGGCAGAAAAAGGGACCTTCACGGTAAAAAAAGGCTTGGCCCAGATGTTGAAAGGCGGAGTAATTATGGATGTTACTAC
TCCGGAGCAAGCGAAGATCGCGGAAGAAGCCGGAGCGTGTGCGGTTATGGCCCTGGAAAGAGTACCGGCAGATATCAGGG
CTGCAGGCGGTGTGGCCAGGATGGCAGATCCTACGGTCATTCTGAGAATAATGGAAGCAGTTACTATTCCGGTGATGGCC
AAGTGCCGGATCGGGCATTTTGTTGAGGCCCAGATTCTTGAAGCGTTGGGGATTGACTACATTGATGAAAGCGAGGTCTT
GACCCCGGCCGATGAAAAATTTCACGTCAACAAGCACCTTTTTAAGGTGCCGTTCGTGTGCGGGGCAAGGGATCTGGGAG
AAGCCCTGCGCCGGATAGGGGAAGGAGCAGCCATGATCCGAACCAAAGGCGAACCGGGAACAGGAAACGTGGTTGAGGCC
GTGCGCCATATGCGTAGGGTTATGGATCAGATTCGTTGGTTGAAGGGACTCCCCAAGGAAGAGCTGATGACCGCAGCCAA
GGATCTGCAGGCACCTTACGAATTAGTAGTAGAGGTAGCAGAGACCGGGCGCTTGCCGGTGGTGAACTTTGCGGCAGGGG
GGATAGCGACTCCTGCAGATGCCGCGCTCATGATGCAGCTAGGAGCGGATGGTAATTTTGTAGGATCGGGCATCTTCAAA
TCGAAAGATCCGATGAAGAGAGCCCGGGCTATAGTGGCAGCGACCACTTACTATGATGATCCGTACGTACTGGCAGAAGT
GTCAAAGGATCTGGGAGAGGCGATGCCTGGTATCGAGATCAGGAACATAGCACCTGAAGAAAGGATGCAAGAACGTGGCT
GGTAA

Protein sequence : 
MAEKGTFTVKKGLAQMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAGGVARMADPTVILRIMEAVTIPVMA
KCRIGHFVEAQILEALGIDYIDESEVLTPADEKFHVNKHLFKVPFVCGARDLGEALRRIGEGAAMIRTKGEPGTGNVVEA
VRHMRRVMDQIRWLKGLPKEELMTAAKDLQAPYELVVEVAETGRLPVVNFAAGGIATPADAALMMQLGADGNFVGSGIFK
SKDPMKRARAIVAATTYYDDPYVLAEVSKDLGEAMPGIEIRNIAPEERMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-86 69
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-86 69
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-86 68