Gene Information

Name : Slip_0493 (Slip_0493)
Accession : YP_003701842.1
Strain : Syntrophothermus lipocalidus DSM 12680
Genome accession: NC_014220
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 499188 - 500078 bp
Length : 891 bp
Strand : +
Note : COGs: COG4974 Site-specific recombinase XerD; InterProIPR011932:IPR013762:IPR011010:IPR010998:IPR 004107:IPR002104; KEGG: swo:Swol_0607 recombinase; PFAM: integrase family protein; integrase; SPTR: Q0AZB8 Tyrosine recombinase XerD subunit; TIGRFAM: tyrosi

DNA sequence : 
ATGGAGGAATACTTAGGGCTGTTCATAGGATACCTTAATTTTGAGCGGGGCTTGTCGGAAAATACTCTGCAAGCCTATCG
ACGCGATATCGGAAGCTTTCTGGTTTACTGCGAAAAGGAGCGCGGTATTTCCGATATTAGTCAGGTTAAGCGGCACGACG
TGGTAGATTTTCTCGGATGGCTGCTCAAGGGCGGTAGGGCTTACTCTAGCCTGGCCCGAACCTTATCGGCTCTGAAATCG
TTTTTTCGTTTTATGCAGAAGGAGAGGTACATTTTGACCAACCCCACCGATAACATCGAGAGCCCGCAAGTGGTTCGCCG
CCTGCCCAGGGTTCTTTCTGTCTCTGAGGTGGAAAAGCTTCTGGAGCAGCCTAATCCGGTGACCGTTCGCGGTATAAGAG
ACAGGGCCATGCTGGAGCTCATGTATGCCACAGGGCTCAGGGTGTCGGAACTGCTGGCCTTGCAATTAGAGGATATTAAC
CTGGTTGCCGGCTTCGTACGCTGTTTAGGTAAAGGTCGAAAGGAACGTATCGTTCCTGTAAACAAGACTTCGGTCTTTTG
GGTGGAGAGGTACATATCCAGGTCCCGGAATCACCTGGTCAAGAGTTCTTTAGAAAGGACGCTCTTCGTCAACGCCAAGG
GGAAAAAACTTAGCCGGCAAGGGTTCTGGAAGATACTGAACGGTTACGCGCGACAGGCGGGGATAGAAAAAGAGATTCAT
CCTCACACGCTCCGCCATTCTTTCGCTACCCATCTCTTGGAAAATGGAGCAGACCTGAGAGCTGTTCAGGAAATGTTAGG
ACATGCAGATATCAGTACAACCCAGATCTATACCCATTTGACCAAGAGCCGGTTGAGGGAAGTATACGAGAAGAGCCACC
CGCGGGCATAA

Protein sequence : 
MEEYLGLFIGYLNFERGLSENTLQAYRRDIGSFLVYCEKERGISDISQVKRHDVVDFLGWLLKGGRAYSSLARTLSALKS
FFRFMQKERYILTNPTDNIESPQVVRRLPRVLSVSEVEKLLEQPNPVTVRGIRDRAMLELMYATGLRVSELLALQLEDIN
LVAGFVRCLGKGRKERIVPVNKTSVFWVERYISRSRNHLVKSSLERTLFVNAKGKKLSRQGFWKILNGYARQAGIEKEIH
PHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHLTKSRLREVYEKSHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-48 45
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-48 45