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Name : Slip_2251 (Slip_2251) Accession : YP_003703557.1 Strain : Syntrophothermus lipocalidus DSM 12680 Genome accession: NC_014220 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 2276089 - 2276676 bp Length : 588 bp Strand : - Note : COGs: COG0250 transcription antiterminator; InterProIPR006645:IPR008991:IPR001062:IPR005824:IPR 015869; KEGG: swo:Swol_2347 NusG antitermination factor; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein; SPTR: Q0A DNA sequence : GTGTCCCTTATATCCTTGGACGAGGAAAAGGAATCTAGGAATGTTGAGGTAGGGACAGACAATCCGGAAAGGCGCTGGTA TGTAGTACATACCTATTCCGGTTACGAGAACAAGGTCAAGGCGAACCTCGAGAAGAGAGTAGCTTCGATGAACATGGAAA ACCAGATTTTCCAGGTATTGATTCCGGAAGAGGACGAGGTCGAATACAAAGGCGGGCAGAAGAAAGTCACTAAGAAGCGC ATCTTTCCGGGGTACGTTTTGGTTGAAATGATAATGACTGACGATTCTTGGGTCACGGTCAGGCATACTCCAGGAGTCAC TGGATTTGTAGGCAGCGGGACCAAGCCTATTCCTTTGCAGCCGCACGAGGTTCAAAAGATACTTAAGCACATGGGCATGT TGGAAACCAAGCCTAAAATCGATGTTGAAGTAGGGGAATACGTGCGGGTTAAAAGCGGTCCGTTTGAAAACTTCGAAGGC ATGGTTAAGGAGATTCTGGCTGATCGGGGGAAGCTGAGGGTAAACATTTCGATGTTTGGCCGTGAGACCCCGGTGGAGTT AGATTACGAGCAGGTAGAGAAACTGTGA Protein sequence : MSLISLDEEKESRNVEVGTDNPERRWYVVHTYSGYENKVKANLEKRVASMNMENQIFQVLIPEEDEVEYKGGQKKVTKKR IFPGYVLVEMIMTDDSWVTVRHTPGVTGFVGSGTKPIPLQPHEVQKILKHMGMLETKPKIDVEVGEYVRVKSGPFENFEG MVKEILADRGKLRVNISMFGRETPVELDYEQVEKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 1e-32 | 46 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 4e-28 | 44 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 4e-33 | 42 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 4e-33 | 42 |
