Gene Information

Name : Slip_2056 (Slip_2056)
Accession : YP_003703368.1
Strain : Syntrophothermus lipocalidus DSM 12680
Genome accession: NC_014220
Putative virulence/resistance : Unknown
Product : glutamate racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0796
EC number : 5.1.1.3
Position : 2088326 - 2089147 bp
Length : 822 bp
Strand : -
Note : COGs: COG0796 glutamate racemase; InterPro IPR004391:IPR001920:IPR018187:IPR015942; KEGG: hmo:HM1_0460 glutamate racemase, PFAM: Asp/Glu/hydantoin racemase; PRIAM: glutamate racemase; SPTR: B0TFH8 glutamate racemase, TIGRFAM: glutamate racemase; PFAM: Asp

DNA sequence :
TTGGAACGTGCACAGCCCGTCGGGGTTTTTGACTCCGGCGTGGGCGGTCTTACGGTGGTAAAGGAGATAATCAAGAGGTT
GCCCTGCGAGAACATAATATACATCGGTGATACGGCAAACGTACCTTACGGTGGGAAGCCGCCCCAAGAACTGATTCGGC
TAGGCAAGAACATAATCGATTTTTTGATTAACCAAGGAGCAAAAGCGGTAGTGGCAGCATGCAACACCAGTTCGTCGGTG
TCGATACCGATTTTAAGAGACATGTGCCCAGTACCGGTAATCGACGTAATAGTACCTGGAGCTGCCAACGCGGCAGCAGT
CACCCGTAATGGCAGAGTCGGGGTCATTGCCACGGAGGCTACGGTGAAGACCGGGGCCTATACCAGACATATCAAAGCTC
TATCTCCGGGGATTTCGGTTTATGAAGTGGCCTGTCCCCGTTTCGTGCCTTTGGTCGAGCAGGGGGTCCTAGAGGGGGAC
GAGGTAGAAGAGGTGGCGAACGAGTACTTGCAACCGTTGCGCCGGCAAGGGATAGACACTCTGGTCATCGGCTGCACTCA
TTACCCTTTCTTGATACCTGTTATTCAAAAAGTAATGGGCAAAGGGGTACGCTTGGTGGATCCGGCGGAAGAAACGGCTA
GCCGGCTAAGAGCGACGCTGTTGGAACGGGGATTGGACAACCCGGGGACTACCAGCCCCCAATACCGGTTTTTTGCTACC
GGTTCCAGCGAATCTTTTTTCCGGGTGGGGAAACTGTTACCCGAGATCGATATCCGAAAGGTGACGACGTTGAAACTGGA
GCGGGGAATATGGGAAGGATAG

Protein sequence :
MERAQPVGVFDSGVGGLTVVKEIIKRLPCENIIYIGDTANVPYGGKPPQELIRLGKNIIDFLINQGAKAVVAACNTSSSV
SIPILRDMCPVPVIDVIVPGAANAAAVTRNGRVGVIATEATVKTGAYTRHIKALSPGISVYEVACPRFVPLVEQGVLEGD
EVEEVANEYLQPLRRQGIDTLVIGCTHYPFLIPVIQKVMGKGVRLVDPAEETASRLRATLLERGLDNPGTTSPQYRFFAT
GSSESFFRVGKLLPEIDIRKVTTLKLERGIWEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1468 YP_001800862.1 glutamate racemase Not tested Not named Protein 1e-47 45