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Name : Slip_1878 (Slip_1878) Accession : YP_003703197.1 Strain : Syntrophothermus lipocalidus DSM 12680 Genome accession: NC_014220 Putative virulence/resistance : Unknown Product : preprotein translocasesubunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 1937233 - 1939728 bp Length : 2496 bp Strand : - Note : COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR000185:IPR011116:IPR011130:IPR014018:IPR 011115:IPR004027; KEGG: swo:Swol_0238 hypothetical protein; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; DNA sequence : ATGGTCTTGGGCTTTTTGAAGAAGGTATTAGATGCGAATGAACGGGAGGTCAAACGGCTGTGGCATATTGTTGAGGAGGT TAACAGCCTGGAGCCTCAGGTGCAGGCCTTAAGCGATGAGGGGCTGGCGGCTAAAACCTTGGATTTTAAGAGGAGACTGG AGAATGGAGATACTCTTGACGATATATTACCTGAAGCCTTTGCGGTAGTGAGGGAGGCGTCCAGGCGCACCCTGGGGATG AGGCACTTTGATGTTCAGATTTTGGGCGGGATAGTCCTGCACCAGGGGCGTATCGCGGAGATGAAAACCGGTGAAGGTAA GACCCTGGTAGCTACTTTGCCCGCATATCTCAATGCCCTCACCGGGCGGGGAGTCCACATAGTGACCGTGAACGATTACT TGGCTTCTCGCGACGCGGAGTGGATGGGGCCAATTTACCGCAGCCTCGGGCTTTCCGTAGGATTAGTGGTCCACGGACTG AACCATGAAGAAAAGCAGCGGGCATACCAGGCCGATGTTACTTATGGTACCAACAACGAATTCGGTTTCGATTACCTGCG GGACAACATGGTTACCACTCCCGAACACAAGGTGCAGAGGGAACGCTATTACGCCATCGTGGACGAAGTAGACTCGATTC TCATCGACGAGGCGCGAACTCCGCTCATAATTTCGGGGGAAGCGGATAAGCCGACTGATCTGTATTACAAAATCGCCAAA TTTGTGCCCAGGCTGAAGCCAGAGGTAGATTACAAGGTGGATGAAAAGGCTCACCTGGTAACCTTGACCGACGAAGGGGT GGCCAAGGTCGAAAAATACTTCGGCATCGAAAACCTGGGTGATGATAGGTACATGGAACTGGCTCATCATGTGAACCAGG GACTGAAGGCGCACGCCTTGATGAAGCGGGACCGGGACTACGTCGTGAAGGATGGCAAGGTCATCATCGTGGACGAGTTT ACAGGGAGGTTGATGTTCGGGCGCCGGTACAGCGACGGCCTGCACCAGGCCATCGAAGCCAAGGAAGGCGTCAAGATTGA AAGGGAAAGCCAGACTTTGGCTACCATTACATTCCAAAATTATTTTCGCCTGTACGAAAAACTGGCAGGGATGACTGGAA CGGCGGCTACGGAAGAGGAAGAGTTTCGCAAGATCTACGGGATGGACGTGGTGGTGATTCCCACCCACAAGCCGATGATT CGCGTCGATCTTCCTGACTTTATTTACCGTACTGAAGAAGGTAAATTCCAGGCAGTCGTAGAAGATATTGTCGAGCGGTA CCGAAAAGGGCAGCCGGTGCTGGTAGGGACCATTTCAATTGAAAAATCGGAAAGGCTCAGCAGTATGCTATCCCGGCGCG GGGTCCCCCACCAGGTTTTAAACGCCAAACACCACGAAAAAGAGGCCCAGATCATCGCCCGGGCCGGGCAGAAAGGGACC GTAACCATTGCAACCAATATGGCTGGTCGAGGGACGGACATCGTGCTGGGAGAAGGCGTGGCCGAGCTGGGAGGGCTCTA CGTTTTGGGGACCGAGAGGCATGAAGCCCGCCGCATAGACAACCAGCTGCGGGGTCGTTCCGGGCGCCAAGGAGACCCGG GGGAATCGCGGTTCTACGTCTCCCTGGAGGACGACCTGATGCGTCTTTTCGGTTCGGAGAGCATCGAGGGCTTAATGGAC CGGCTGGGGATGGATGATTCCGTACCTATTGAAAACAAACTGGTTTCCAGGGCTATTGAGAACGCTCAGAAGAAAGTGGA GAGCCGGAATTTCGAGATCCGTAAGCATGTTCTGGAGTACGATGATGTCATCAACCAGCAGCGTGAAGTTATATACGCGG AACGCGACAAGGTGCTCTATGGAGAAGACCTGACCGAAACCGTGATATCTATGATGGAAGACGTGGCTGAGCTGATTGTG GACCGATTCGCGGGTGAGGAGAAATACGCGGACGGGTGGGATTTAGCGGGGCTCTTTAATTACGTGGAGCGCAACTACAT CCCGGAACCGGATTTTGGACCCGAGGAATTTAAGGGCATGACCCGGGATGACGTGGTTTCGTTCTTAAAGGAAAAGGGAC GCCTGTTTTACGAAAAGCGCCGGTCCGAGATGGGCGACGAGACCATGCAGGCTCTGCAAAAGGTTTTGTTGCTCCGCATA ATCGACGACAAGTGGATGGACCACATCGATGCCATGGACCAGCTACGGCACGGTATAGGTCTCAGGGCTTACGGGCAGCG GGATCCGCTGGTTGAGTATAAATTCGAAGCTTATAACGCGTTTCAGGATATGGTTGCCAGTATTAAAGAAGATGTTGTCA GGTATGTGTTCCGGGTCAAGGTGGTCAGCCAGCCCCGGGAAAGGGTGACGGTTGAAAGCCGGGAGCAGGAGGGCGGCCGT AAGCCGGTGCGGTCTTCGAAGATCGGGCGCAACGACCCGTGCCCTTGCGGCAGCGGTAAAAAGTATAAGAAGTGTTGCGG GAGAGGAGTTGGCTGA Protein sequence : MVLGFLKKVLDANEREVKRLWHIVEEVNSLEPQVQALSDEGLAAKTLDFKRRLENGDTLDDILPEAFAVVREASRRTLGM RHFDVQILGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALTGRGVHIVTVNDYLASRDAEWMGPIYRSLGLSVGLVVHGL NHEEKQRAYQADVTYGTNNEFGFDYLRDNMVTTPEHKVQRERYYAIVDEVDSILIDEARTPLIISGEADKPTDLYYKIAK FVPRLKPEVDYKVDEKAHLVTLTDEGVAKVEKYFGIENLGDDRYMELAHHVNQGLKAHALMKRDRDYVVKDGKVIIVDEF TGRLMFGRRYSDGLHQAIEAKEGVKIERESQTLATITFQNYFRLYEKLAGMTGTAATEEEEFRKIYGMDVVVIPTHKPMI RVDLPDFIYRTEEGKFQAVVEDIVERYRKGQPVLVGTISIEKSERLSSMLSRRGVPHQVLNAKHHEKEAQIIARAGQKGT VTIATNMAGRGTDIVLGEGVAELGGLYVLGTERHEARRIDNQLRGRSGRQGDPGESRFYVSLEDDLMRLFGSESIEGLMD RLGMDDSVPIENKLVSRAIENAQKKVESRNFEIRKHVLEYDDVINQQREVIYAERDKVLYGEDLTETVISMMEDVAELIV DRFAGEEKYADGWDLAGLFNYVERNYIPEPDFGPEEFKGMTRDDVVSFLKEKGRLFYEKRRSEMGDETMQALQKVLLLRI IDDKWMDHIDAMDQLRHGIGLRAYGQRDPLVEYKFEAYNAFQDMVASIKEDVVRYVFRVKVVSQPRERVTVESREQEGGR KPVRSSKIGRNDPCPCGSGKKYKKCCGRGVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 2e-118 | 42 |
