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Name : Slip_1841 (Slip_1841) Accession : YP_003703161.1 Strain : Syntrophothermus lipocalidus DSM 12680 Genome accession: NC_014220 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1894196 - 1894654 bp Length : 459 bp Strand : - Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR000037:IPR020081; KEGG: swo:Swol_0281 SsrA-binding protein; PFAM: SmpB protein; SPTR: Q0B075 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGAGCAAGGAAGGTTATAAAGTAGTGATTGAGAACCGCAAAGCCCGCCATAATTATCATATTGAAGAAACGTATGAAGC CGGCCTTTGCTTGGTAGGGACCGAAGTAAAGTCCTTGCGAGAAGGAAAAGGGAATATACAGGACGCTTATGCAGAGGTCA AGGACGGGGAAGTATGGGTGAACAACTTCCATATAAGCCCCTATGAGAAGGGCAACAGGTTCAACCACGAACCTAAACGG CCCAAGAAACTGCTTTTACACCGCCGGGAGATAAACCGTCTCTACGGTTTGGTTCAGAAAAAAGGTTATACGCTCGTCCC TTTGCGAATATATTTCAAAGACGGAAAAGCTAAGATGGCCCTGGCGGTGGCCCGCGGCAAGAAGATGCACGACAAACGTG AGGACATGGTAGCGCGGGATGTGAAGCGGGAGATTGAACGGGCCATGAAGGCCAAATAA Protein sequence : MSKEGYKVVIENRKARHNYHIEETYEAGLCLVGTEVKSLREGKGNIQDAYAEVKDGEVWVNNFHISPYEKGNRFNHEPKR PKKLLLHRREINRLYGLVQKKGYTLVPLRIYFKDGKAKMALAVARGKKMHDKREDMVARDVKREIERAMKAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 4e-37 | 56 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-34 | 56 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 2e-27 | 43 |
