Gene Information

Name : Slip_0172 (Slip_0172)
Accession : YP_003701537.1
Strain : Syntrophothermus lipocalidus DSM 12680
Genome accession: NC_014220
Putative virulence/resistance : Virulence
Product : undecaprenyl-phosphate galactose phosphotransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : 2.7.8.6
Position : 187099 - 187770 bp
Length : 672 bp
Strand : +
Note : COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: dtu:Dtur_0586 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; PRIAM: undecaprenyl-phosphate galactose phosphotransferase; SPT

DNA sequence : 
ATGACGCCAATGAGTAAAGCCGCAAAGAGAGTTATGGATGTTTTGATATCGGTTTTGGGACTTATTGTCTTCACGCCTGT
CATTTTTGTGGTGGCATTGCTCATATTCATGAGCATGGGAAGACCGGTCTTATTCACTCAGGAGAGGCCGGGTAAGGACG
GCAGGATTTTTCGTCTAATTAAATTTAGAACTATGACTGATGAAAGGAATGCCGAAGGCAACCTCCTGCCCGACGAACAG
CGGCTGACGCGTTTGGGACGGTTTTTGCGCTCTACCAGCTTGGACGAGCTTCCGGAGCTTTTCAACGTTCTCAAAGGAGA
CATGAGCCTGGTAGGGCCGCGGCCGCTTCTCATGCAGTATCTGGACAGGTACACCCCGGAGCAGGCCAGGCGCCACGAGG
TCAAACCGGGGATTACCGGCTGGGCGCAGGTCAATGGGCGGAACGCCATCACCTGGGAGGAGAAGTTTACACTTGATGTG
TGGTATGTGGACAACTGGTCTCTGTGGTTGGACCTGAAGATTCTGGTCCTTACTTTAGTGAAGGTCATAAAGCGGGAGGG
CATAAGTGCACCGGGCGAGGCAACGATGCCAGAGTTTTTGGGGAGTTTTCTTGAAAAGGACATTTCCCTGCGAGAGGCGG
CGGCGGTTATAGACGAAGACTCGCGATTCTGA

Protein sequence : 
MTPMSKAAKRVMDVLISVLGLIVFTPVIFVVALLIFMSMGRPVLFTQERPGKDGRIFRLIKFRTMTDERNAEGNLLPDEQ
RLTRLGRFLRSTSLDELPELFNVLKGDMSLVGPRPLLMQYLDRYTPEQARRHEVKPGITGWAQVNGRNAITWEEKFTLDV
WYVDNWSLWLDLKILVLTLVKVIKREGISAPGEATMPEFLGSFLEKDISLREAAAVIDEDSRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-25 45
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-27 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Slip_0172 YP_003701537.1 undecaprenyl-phosphate galactose phosphotransferase VFG1309 Protein 1e-26 43