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Name : Slip_0161 (Slip_0161) Accession : YP_003701526.1 Strain : Syntrophothermus lipocalidus DSM 12680 Genome accession: NC_014220 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 172565 - 174400 bp Length : 1836 bp Strand : + Note : COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR016040:IPR003869; KEGG: swo:Swol_0128 hypothetical protein; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Q0B0M1 uncharacterized protein; manually curated; PFAM: polysaccharide bios DNA sequence : ATTCGGCGCAGGATAGGCCTTGTTATCCTGGATGCCGCGATAGTCGCGGCATCAGGCTACATATCGTTGTTCCTGAGACT CGACGGCGATATACCAAAACAATACTTAGATGGATTGCTGACGGTTCTTCCTCTTACCATAGCATGTTACTTGGCGGCCT TTGCCTATTTCAAGCTCTATCGACAGATGTGGGAGTATGCCAGTATAAGGGAGCTTATTATCATTGTCAAGGCGGCTACC GCTGGAGCGGCGGGGTCAACCCTCTGCACCTATCTCATCGGTTGGACCCTTCTTCCTCGCAGTGTACATATTATCGAGTG GATTATAACTATCGGTTTGATCGGTCTTTCCCGCATGAGCTCTAGGATAATTCGTGACGTGGGAAACGGTGGTTCTTCAG GAGGCAGGAGCCGGACGCTTATCGTGGGCGCGGGAGATGCCGGGATGTTGGTGGCAAGAGAGCTGCTTTCCCCAAACAGT AAGGCAACCCTTCATCCGGTGGGTTTTGTGGACGACGATCCGGGCAAAAGAGGACTGATGTTCAGTGGGCTGAAAGTTTT GGGAGACAGGCGTGACATCCCGCGCCTGGTGGAGAGGCACGATGTAGACACGATTCTCATTGCGATGCCCTCCGTGCCGG GAAGAACCGTCCGCGAGATCATTGATATATGCGGTCAAACCAAGGCCAGCATCAAGGTGCTTCCAGGGGTCTACGAATTG ATAAACGGAAGAGTGAGGGTCAGCCGCATCAGATCGGTTTCGGTCGAGGACCTCCTGCGGCGGGAGCCGGTCAAAGTGGA TCTAGAGGGGATCGCGGGATACCTTAAGGGCAAAGTGGTCCTGGTTACGGGGGGAGCGGGTTCCATCGGATCGGAACTCT GCCGGCAAGTGTGTTCGTTTAAACCCGCAGGTTTGATCGTCTTGGACAACTCCGAAAACGGCCTTTTTGAGATAGAACTG GAACTGCGCAAGAGCTACCCCGAAGCCCAAATCGTCCCCTGCCTGGCCGATGTCAAGGACCACGCTAAAATCGAAACTGT TTTCAGCAGGCACAGGCCCCAGGTAGTATTTCACGCTGCTGCTTATAAGCACGTTCCCATGATGGAAGTCAATCCCGATG AGGCGGTGAAGAACAATGTGGGCGGGACCATCGTGGTCGCCTGCGCGGCAAAAAACTACGGGGCTGAGGTATTCATTTAC ATATCGACCGACAAGGCAGTCAACCCCACCAGCGTCATGGGCGCCACCAAGCGGGTGGGCGAGCTGATAGTTCAGTCCAT GAACGGCAAGGGCAAGACGCGTTTCGCCTCCGTAAGGTTCGGCAACGTCCTGGGGAGCAGGGGCAGCGTGGTTCCCATTT TTGCCAGCCAAATAGCCAAAGGGGGCCCGGTGACCGTTACCCACGAAGACATGCAGCGCTACTTCATGACCATACCTGAG GCTGTGCAGCTGGTCATCCAGGCGGGAGCTCTGGCTCAGGGCGGAGAAATATTCGTTCTCGACATGGGCGAGCCCGTAAA AATCATCGATTTAGCGCGGGATATGATCAGGCTTTCTGGGCTCCGGCCGGATGTTGACATAAAGATCGAGATTACCGGGA TAAGACCGGGCGAAAAACTGTGTGAAGAGCTCCTGAGCAGAAAAGAGTTGCTCGACGTAACGCGGCATCAGAGAATATTT ATTGCTCGGGAAAACGGCGAAGAGGACCTAGAGAAGATTGGTGCCGTATTGAAGACATATTTGAAGTCGCTAGACGCCGC AGTTGGGTCAGAGATTTCCCAAATATTGCCGGAGCTGTCGCCAAGTCTTAGGCAATCGGCGAGCGGGCGGTTGTAA Protein sequence : MRRRIGLVILDAAIVAASGYISLFLRLDGDIPKQYLDGLLTVLPLTIACYLAAFAYFKLYRQMWEYASIRELIIIVKAAT AGAAGSTLCTYLIGWTLLPRSVHIIEWIITIGLIGLSRMSSRIIRDVGNGGSSGGRSRTLIVGAGDAGMLVARELLSPNS KATLHPVGFVDDDPGKRGLMFSGLKVLGDRRDIPRLVERHDVDTILIAMPSVPGRTVREIIDICGQTKASIKVLPGVYEL INGRVRVSRIRSVSVEDLLRREPVKVDLEGIAGYLKGKVVLVTGGAGSIGSELCRQVCSFKPAGLIVLDNSENGLFEIEL ELRKSYPEAQIVPCLADVKDHAKIETVFSRHRPQVVFHAAAYKHVPMMEVNPDEAVKNNVGGTIVVACAAKNYGAEVFIY ISTDKAVNPTSVMGATKRVGELIVQSMNGKGKTRFASVRFGNVLGSRGSVVPIFASQIAKGGPVTVTHEDMQRYFMTIPE AVQLVIQAGALAQGGEIFVLDMGEPVKIIDLARDMIRLSGLRPDVDIKIEITGIRPGEKLCEELLSRKELLDVTRHQRIF IARENGEEDLEKIGAVLKTYLKSLDAAVGSEISQILPELSPSLRQSASGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-94 | 47 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-94 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Slip_0161 | YP_003701526.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 6e-96 | 46 |
