Gene Information

Name : Slip_1571 (Slip_1571)
Accession : YP_003702898.1
Strain : Syntrophothermus lipocalidus DSM 12680
Genome accession: NC_014220
Putative virulence/resistance : Unknown
Product : ammonium transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0004
EC number : -
Position : 1638627 - 1639958 bp
Length : 1332 bp
Strand : -
Note : COGs: COG0004 Ammonia permease; InterPro IPR001905:IPR018047; KEGG: dae:Dtox_1019 ammonium transporter; PFAM: ammonium transporter; SPTR: C8W3D8 Ammonium transporter; TIGRFAM: ammonium transporter; PFAM: Ammonium transporter Family; TIGRFAM: ammonium tran

DNA sequence :
ATGACGGGCATAAGGCGAGGTTTGTCGATGGCGTTGGTAAACATGGGACTCCTGATAGCAGCAGTATCACCGCCGGCTTG
GGCTGCAGGGCCTTCATCTCTTGATTCTGGCGATACGTCGTTCATTTTGATTTGCGCTTCTCTGGTCTTCTTGATGACCC
CTGGATTGGCCCTCTTTTATGGGGGCATGGTCCGGCGCAAAAACGTCCTGAGTATCTTAATGCAGTGTTTTGTCATCATG
GGTCTGGTATCCGTACAGTGGGTGTTGGTTGGGTATTCCCTGTGTTTCGGTCCTGATATCGGGCACGTCGTTGGCGGGTT
GGATTGGGTTGGCTTAAGAGGGGTCGGCACCGGACCTAATGCCGATTATGCCGCTAGCATACCACATTACGCGTTTTCCG
CCTTCCAGATGATGTTCGCTATCATCACTGCAGCTTTGATTACCGGGGCAATTGCCGAGCGCATGAGGTTTTCGGCTTTC
GTGTTGTTTGTCTTGCTCTGGACTACCTTAGTTTACGATCCCCTTGCCCACTGGGTCTGGGGTGTTGGCGGGTGGTTGAG
GAACCTTGGAGCCCTCGATTTTGCTGGAGGAACAGTTGTACACATAAGCTCCGGATTGGCCGGATTAGCTGGTGCTCTGG
TGCTGGGTAAGAGAGCGAATTTAGGAAAGGAGACTATGATCCCGCACAATTTGCCTTTTACGGTTATAGGGGCCGGCCTT
CTATGGTTTGGATGGTTCGGATTTAACGCCGGCAGTGCCCTTGCGGCTAACGGCCTAGCTGCGAGCGCGTTCGTGGTGAC
GAATACCTGCGCGGCTACAGCAGCTCTTTCCTGGGCTGCAGCCGAATGGGTCCACCACGGAAAGCCTACGGTCCTGGGGG
TGGCTTCTGGGATAGTGGCCGGTTTGGTAGCGATTACGCCCGCCGCAGGGTTTGTGGGGCCTGCTGCTGCGGTATTAATT
GGTCTGGTGGCTGGACCTGCCTGCTATTTTGCTGTTAGCAAGGCCAAAGCCGCTTTGGGATACGATGATGCCCTCGACGC
GTTCGGTGTTCACGGGGTTGGCGGCACGTTGGGTGCTATTCTTACAGGGGTTTTCGCTAGTACAACCGTGAACCCTGCTG
GTGCGAACGGCCTTTTGTACGGTAATCCGCGTTTGGTGCTGATTCAAATCGCAGCGGTTCTTGCAAGTATAGTTTATGCT
TTTGTAGTAACAGCTATCATATTGAAGGCAGTGAACCTGGTAACGCCTTTACGGGTGCCGAAGGAAGAAGAGGAGGTCGG
CCTAGACGTAACCCAACACGGTGAAGAAGCGTATGGCTACGACGTGGCCTGA

Protein sequence :
MTGIRRGLSMALVNMGLLIAAVSPPAWAAGPSSLDSGDTSFILICASLVFLMTPGLALFYGGMVRRKNVLSILMQCFVIM
GLVSVQWVLVGYSLCFGPDIGHVVGGLDWVGLRGVGTGPNADYAASIPHYAFSAFQMMFAIITAALITGAIAERMRFSAF
VLFVLLWTTLVYDPLAHWVWGVGGWLRNLGALDFAGGTVVHISSGLAGLAGALVLGKRANLGKETMIPHNLPFTVIGAGL
LWFGWFGFNAGSALAANGLAASAFVVTNTCAATAALSWAAAEWVHHGKPTVLGVASGIVAGLVAITPAAGFVGPAAAVLI
GLVAGPACYFAVSKAKAALGYDDALDAFGVHGVGGTLGAILTGVFASTTVNPAGANGLLYGNPRLVLIQIAAVLASIVYA
FVVTAIILKAVNLVTPLRVPKEEEEVGLDVTQHGEEAYGYDVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00291 YP_008211617.1 Ammonia permease Not tested AbaR26 Protein 2e-56 54
BJAB07104_00287 YP_008207752.1 Ammonia permease Not tested AbaR25 Protein 2e-56 54