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Name : Slip_0150 (Slip_0150) Accession : YP_003701515.1 Strain : Syntrophothermus lipocalidus DSM 12680 Genome accession: NC_014220 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 157106 - 158569 bp Length : 1464 bp Strand : + Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR006195:IPR018149:IPR016027:IPR012340:IPR 004365:IPR004364:IPR002313; KEGG: swo:Swol_0116 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helica DNA sequence : TTGTCAGAAGATACCCACCAGTTGAAGCAGGTACGATTGGACAAACTCCAAGAGCTACGGGATAAAGGAATCGAGCCTTA CGGAGGAAGGTTCGAGCGAAATGCAACTGCAGCCGACATCAAGAACAATTATCCCGGCAACGAAGGACAGGCAGTGCGCA TCGCGGGCCGTATCATGGCGCGTCGCACTCACGGCAAGGCCGGTTTTGCGAACCTGCAGGACCAGTCCGGTCAGATCCAG CTGTACTTCCGTCTAAACGACCTCGGAGCCGAAAAGTACGAATTGTTCAAGTCTATGGATATCGGAGATATCATCGGGGT TGAAGGGACAGTGTTTTTGACCAAGACCCAGGAGATAACGGTGCACGTACAGGACCTGGTTTATTTGGCCAAGGCTCTGA ATCCCCTGCCCGAAAAATGGCACGGGCTCAAGGACGTGGAACTGCGCTACCGGCAGCGTTACGTCGATCTCATCGTGAAC CCCCCGGTCCGGGAGGTCTTTGTCAAGCGCAGCCAGATCATCAGAGAGATGCGGCGCTACCTGGACGAGCGCGGGTTTCT CGAGGTTGAGACTCCGATGATGCAGCCTATCCCGGGAGGAGCGGCTGCCCGCCCGTTTATCACCCACCACAACGCCCTGG GGATAGACCTGTACCTGCGCATCGCTCCCGAACTGTATCTGAAGCGGCTTTTGGTCGGCGGGTTCGAGAAGGTGTACGAG ATCAACCGCAACTTCCGCAACGAAGGCATTTCCACCAAGCACAACCCCGAGTTCACCATGCTCGAACTGTACCAAGCCTA TGCCGATTTCCAAGACATGATGCGGCTTACCGAAGATTTAATCTCCTCGGTGGTAAAGAGCGTCTTCGGGACCATGGTAG TCGAGTACCAGGGGAGCCGGCTGGATTTCACCCCTCCCTGGCAGCGCCTGCCCATGCTGGAGGCGGTTAAGAAGTATGCC GGGGTTGACTTTACCGATCTCAAGAGCGATGAAGAGGCCCAGGAAGCGGCGCGGAGCCTGGGGCTGGAGGTAGAAGCCGA GGCCACCCGCGGCGAGGTAATTAACCTGGTGTTCGAAGAGTTTGTCGAGCCCCACCTGGTGCAGCCGGTCTTCGTTTACG GGCACCCGGTGGACGTATCGCCCTTGGCCAAGCGTAACCGCGAGAATCCCGAGTTCACCGACCGGTTCGAGGTCTTTATA ATGAACCGGGAGATCGCAAATGCCTTCTCGGAGCTGAACGACCCCATCGACCAGCGCTCCCGGTTTGAAAAACAAGTGGC CAAGAGGGAAAAAGGAGATACCGAAGCCCACATGATGGACGAGGACTACATAAACGCGCTCGAGTACGGGATGCCTCCGG CCGGCGGGCTCGGCATCGGCATCGACCGGCTGGTTATGCTTTTGACCGACTCCCCATCTATTCGCGACGTCATCCTCTTT CCGACCCTCCGCCCTACTCAGTGA Protein sequence : MSEDTHQLKQVRLDKLQELRDKGIEPYGGRFERNATAADIKNNYPGNEGQAVRIAGRIMARRTHGKAGFANLQDQSGQIQ LYFRLNDLGAEKYELFKSMDIGDIIGVEGTVFLTKTQEITVHVQDLVYLAKALNPLPEKWHGLKDVELRYRQRYVDLIVN PPVREVFVKRSQIIREMRRYLDERGFLEVETPMMQPIPGGAAARPFITHHNALGIDLYLRIAPELYLKRLLVGGFEKVYE INRNFRNEGISTKHNPEFTMLELYQAYADFQDMMRLTEDLISSVVKSVFGTMVVEYQGSRLDFTPPWQRLPMLEAVKKYA GVDFTDLKSDEEAQEAARSLGLEVEAEATRGEVINLVFEEFVEPHLVQPVFVYGHPVDVSPLAKRNRENPEFTDRFEVFI MNREIANAFSELNDPIDQRSRFEKQVAKREKGDTEAHMMDEDYINALEYGMPPAGGLGIGIDRLVMLLTDSPSIRDVILF PTLRPTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-125 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Slip_0150 | YP_003701515.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-125 | 53 |
