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Name : Slip_1326 (Slip_1326) Accession : YP_003702658.1 Strain : Syntrophothermus lipocalidus DSM 12680 Genome accession: NC_014220 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 1373899 - 1374687 bp Length : 789 bp Strand : - Note : COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transporter ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: drt:Dret_1645 ABC transporter related; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: A1HSX9 ABC transporter related; PFAM: A DNA sequence : ATGCTGTCGGTAGAAGGAGTAAGCAAGGTATTCTTAGCGGGAGGCAGGCAGGTTGTTGCCTTAGAAGATATCAACCTCGG GATCGAGCCCCAGGAATTTGCGGTTATCGTCGGTCCTAGCGGGTGCGGTAAAACTACTCTGCTCCGCATGGTGGCCGGGC TGGAGAAACCTACTTCCGGCACTATCACGCTGCACGGGCGTCCCATTAGTGGACCCGGAGCCGACCGGGGGATGGTCTTT CAGGCTTACACCTTGTTCCCGTGGCTTACAGTAGAAGATAACGTGGCCTTTGGGCCCAGGCTGCGCAGGATTCCCGAAAA ACAAGTGGAATCAATAGTCGACCATTATCTTCAAGTTACTGGTTTGCTTGAATTTAGAAGACTCTATCCTAAGGCGCTCT CGGGAGGTATGAAGCAGAGGGTGGCAATTGCCAGGGCCATGGCCAACGAGCCGGACATCTTATTAATGGACGAGCCGTTT GGTGCATTAGATGCCCAGACCCGTGTGGTCATGCAGGAGCTGCTCCTGAGAGTCTGGGAGGAAGACCACAAGACGGTGTT GTTCATCACCCACGACATCGACGAGGCTATTTTCTTGGCTGATACTATTCACGTTATGACGCGGCAGCCGGGTACCATAA AGAAAACGATTAAGGTTTCTCTGCCTCGTCCGCGCGATCACAGCATCCTTTTGACTCCCGAGTTCATAGCCATGAAAAAA GAGATAGTGGACATGATATGGGAAGAGAGTAAAAAAGCGGCCGAAGAAGTGTCAGTTCTCGATGTTTAG Protein sequence : MLSVEGVSKVFLAGGRQVVALEDINLGIEPQEFAVIVGPSGCGKTTLLRMVAGLEKPTSGTITLHGRPISGPGADRGMVF QAYTLFPWLTVEDNVAFGPRLRRIPEKQVESIVDHYLQVTGLLEFRRLYPKALSGGMKQRVAIARAMANEPDILLMDEPF GALDAQTRVVMQELLLRVWEEDHKTVLFITHDIDEAIFLADTIHVMTRQPGTIKKTIKVSLPRPRDHSILLTPEFIAMKK EIVDMIWEESKKAAEEVSVLDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 6e-45 | 42 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 8e-28 | 41 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-26 | 41 |
