Gene Information

Name : Slip_1223 (Slip_1223)
Accession : YP_003702561.1
Strain : Syntrophothermus lipocalidus DSM 12680
Genome accession: NC_014220
Putative virulence/resistance : Unknown
Product : daunorubicin resistance ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1256816 - 1257793 bp
Length : 978 bp
Strand : -
Note : COGs: COG1131 ABC-type multidrug transporter ATPase component; InterPro IPR017871:IPR003593:IPR003439:IPR005894; KEGG: chy:CHY_0900 daunorubicin resistance ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: Q3ADN5

DNA sequence : 
ATGATAATTGCCACTGAAAAGCTAACCCGCAAGTACGGTAGACTGGTCGCTGTAGACAGCGTGGACCTCGAAGTTTACGA
GGGAGAGATATTTGGGTTTCTAGGCCCCAACGGCGCAGGCAAAACCACTACCATTCACATGCTCTGCACTTTGCTGAAGC
CCAGCGGTGGGGAAGCCTGGGTTGCTGGGTACAATGTCGAGCACGAACAGACCCTGGTGAGGCGGAACATCGGGTTGGTT
TTTCAAGAGCCCACTTTGGACGAAAATCTCACGGCCACAGAAAACCTGGTCTTTCACGGTATGATCTACGGTTTGACCGG
CAGGTATCTCGAGGAGCGTATCAAAGAAGTGATGAAACTGGCTCTGCTGTGGGAACGGCGTAACGACTTGGTCAAGACCT
TCTCCGGAGGAATGAAGCGACGCCTGGAAATCGCTCGTGGCCTGGTCCATTTGCCGAAGGTGCTGTTCTTGGACGAACCG
ACCCTGGGGCTGGATCCCCAGACTAGGAAACATATATGGGATTACATCAGACGTACCCGGGAGGAGACCGGGACCACGGT
CTTTATGACCACCCATTATATGGATGAAGCAGAGAACTGTGACCGCATAGCGATTATAGACCACGGGCGTATCATCGCCT
GCGATACCCCCGATAATCTCAAACAAATGGTCAAAGGGGACGTGGTAGAAGTCACATCTTCCAAGGTACACCAACTGGCG
GCCTTTTTGGAAGAACGTTTTGAGGTGAAGCCGGAGTTCATCCAGGAAGGGCTCAAGTTCGAGGTTCAGCGTGCGGACGA
GCTTTTGCCGGTTCTTTTGCAGCAAGCGGGGACGGGGTTGATTGAGAAAGTAAATTTTGCTAAGCCGACTTTAGATGATG
TATTCTTGCGACTCACCGGTAAAAGCATGCGGGATGAGGACGCGGATCCGCGAGGAGAGTTCAGGCGCCGGATTGGAATG
AGGCTCAGGAAAGGATGA

Protein sequence : 
MIIATEKLTRKYGRLVAVDSVDLEVYEGEIFGFLGPNGAGKTTTIHMLCTLLKPSGGEAWVAGYNVEHEQTLVRRNIGLV
FQEPTLDENLTATENLVFHGMIYGLTGRYLEERIKEVMKLALLWERRNDLVKTFSGGMKRRLEIARGLVHLPKVLFLDEP
TLGLDPQTRKHIWDYIRRTREETGTTVFMTTHYMDEAENCDRIAIIDHGRIIACDTPDNLKQMVKGDVVEVTSSKVHQLA
AFLEERFEVKPEFIQEGLKFEVQRADELLPVLLQQAGTGLIEKVNFAKPTLDDVFLRLTGKSMRDEDADPRGEFRRRIGM
RLRKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 1e-31 41