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Name : Slip_1127 (Slip_1127) Accession : YP_003702469.1 Strain : Syntrophothermus lipocalidus DSM 12680 Genome accession: NC_014220 Putative virulence/resistance : Unknown Product : adenine-specific DNA-methyltransferase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 1169248 - 1170819 bp Length : 1572 bp Strand : - Note : COGs: COG0286 type I restriction-modification system methyltransferase subunit; InterPro IPR003356:IPR002296; KEGG: dol:Dole_2236 N-6 DNA methylase; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: A1HQI1 N-6 D DNA sequence : ATGCCGTCAATCAACAATGAAATAGAAAAGAAGCTGTGGAACGCGGCAGACCAATTAAGAGCTAACTCGAAATTAAAAGC TTCAGAATACTCGGTTCCCGTGCTTGGGCTGATATTCCTGCGCTTTGCCGATCACAAGTTCAGTATGGCCGAAAAGGAGC TGGCTAAAAAGGCTAAGGCAGGTTCAAGGCGTGTTATTGGCAAAGCTGACTATCAAGCCAGGGGGGTTATGTACCTTCCA GAACAGGCGAGATATTCTTACCTCCTGAAGCTGCCGGAAGGGGAGAATATCGGGAAGGCTGTGAACGAAGCCATGAAAGC CATCGAAGCCGAGAACGAAGACCTTAAGGATGTCCTTCCCAAAACCTATACCCGGCTGGACAACGATACACTGATAGCTC TACTAAAAACATTCTCCGAAATCCCGATGGACGTCGAAGGGGACGTTTTTGGCAACGTATATGAATACTTTCTCGGCGAG TTCGCACGTTCAGAAGGGCAGCGGGGCGGGGAATTTTACACGCCCACTTCGCTGGTAAAGCTAATTGTCGAGGTCATCGA GCCATACCGAGGACGCATCCTGGACCCGGCCTGCGGGTCAGGCGGCATGTTTGTCCAGTCGGCCCGGTTTGTCCAGAATC ACAAGAAAAACCCCAGCAGTGAGATATCCATCTACGGGCAGGAGAAAGTGGCCGAAACAGTCAGACTGTGCAAGATGAAC CTCGCGGTCCACGGGCTTTCGGGGGACATCCGTCAGGCCAACACCTATTACGAGAATGTACATAACTGCATAGGCCGGTT CGATTTTGTCATGGCTAATCCCCCCTTCAACGTGGACGGGGTGGACAAAGAGAAGATCAAAGACGACCCGCGTTATCCTT TTGGGCTTCCCACTGTCGATAACGCCAACTACATCTGGATCCAGGAGTTTTACAGCGCTTTAAACGATACTGGACGGGCG GGCTTCGTCATGGCCAACTCTGCCAGCGATGCCAGGGGTTCTGAACTCGAGATAAGAAAAAAGCTCATCCAGGACCGGGT TGTGGATGTGATGATCACCATCGGGCCTAACTTCTTCTATACCGTTACTCTACCATGCACCCTCTGGTTCTTCGACAAGG GTAAACGGCAGACTGAGCGGGGTAATAAAGTGCTGTTCATCGATGCGAGGAACATCTACCGCCAGGTAGACCGGGCCCAC CGCGAGTTTACCCCGGAACAGATTGAGTTTATCGCCAATATCGTACGCTTGTACCGGGGCGAGCCGGTGGAGACCGTAAA TGGGTCGGATGAAATGCTCGAGGATAAGTTTCCGGAAGGCAAATATGTGGATGTGCCTGGCCTGTGCAAGGTAGCGACTA TAGAGGAAATCGAAGCCCAGGGCTGGAGCCTCAACCCCGGCAGGTATGTTGGTGTGGCTCAGAAGGAAGAGGAAGACTAT GATTTCACGGAAAGGCTGCAAGAGCTGAACGAAGAGTTGGAGCAGCTCAACGCCGAGGCAGCGGAGCTGGAGGAAAGGAT AAGGGAGAATGTGGGAAAGTTATTGGAGGGTTTTGATGAAAAGCTCGACTAA Protein sequence : MPSINNEIEKKLWNAADQLRANSKLKASEYSVPVLGLIFLRFADHKFSMAEKELAKKAKAGSRRVIGKADYQARGVMYLP EQARYSYLLKLPEGENIGKAVNEAMKAIEAENEDLKDVLPKTYTRLDNDTLIALLKTFSEIPMDVEGDVFGNVYEYFLGE FARSEGQRGGEFYTPTSLVKLIVEVIEPYRGRILDPACGSGGMFVQSARFVQNHKKNPSSEISIYGQEKVAETVRLCKMN LAVHGLSGDIRQANTYYENVHNCIGRFDFVMANPPFNVDGVDKEKIKDDPRYPFGLPTVDNANYIWIQEFYSALNDTGRA GFVMANSASDARGSELEIRKKLIQDRVVDVMITIGPNFFYTVTLPCTLWFFDKGKRQTERGNKVLFIDARNIYRQVDRAH REFTPEQIEFIANIVRLYRGEPVETVNGSDEMLEDKFPEGKYVDVPGLCKVATIEEIEAQGWSLNPGRYVGVAQKEEEDY DFTERLQELNEELEQLNAEAAELEERIRENVGKLLEGFDEKLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 5e-84 | 43 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 5e-85 | 43 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 1e-83 | 42 |
