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Name : Slip_0011 (Slip_0011) Accession : YP_003701384.1 Strain : Syntrophothermus lipocalidus DSM 12680 Genome accession: NC_014220 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 13259 - 14530 bp Length : 1272 bp Strand : + Note : COGs: COG0172 Seryl-tRNA synthetase; InterProIPR006195:IPR002317:IPR018156:IPR010978:IPR 015866:IPR002314; KEGG: swo:Swol_0010 serine--tRNA ligase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; SPTR: Q0B0Y5 Seryl-tRN DNA sequence : ATGCTGGACCCTAGACTGGTTAGGGCAAACCCCGAAATGGTTGAAAAAGCGCTTTCGGCTCGGGGAATTCAAGGGGGACT AGACCAGTTCCTGAAGCTTGATAAGGAAAGAAGGGCCTGTCAGGTTAGAGCGGACGAGCTCAAGAATTTCCGGAACCAGG CATCAGTTGAGGTTGGGCGCCTGAAGAAGGAAGGAAAAGACACGAACGAACTGCAAGCCAGGATCCGGGAAGTAGGACAG GAGATAAAGGGCCTGGACGACCGGATGCGGGAGATTGACGAGCAACTTACCGAAATACTGCTTAATATTCCGAATCTCCC GCATGAATCGGTGCCTTTAGGTGCTGGGGATGCTGACAACGTCGAGGTGAGAAGGTGGGGGGAACCCCGAAAGTTCGATT TTGAACCACAGGCTCACTGGGATATCGGGGTAGCGCTGGATATACTTGACTTTGAGCGGGCAGCGAAACTGTCGGGGGCT AGGTTTACCGTTTACAAGGGATTGGGAGCGCGCCTGGAGAGGGCGCTGATCAGCTTCATGCTGGACTTGCACGTGGATAA ACACGGATACCGGGAAGTGTTTCCCCCGTTTATGGTGACCGCTGACTGCATGGTGGGAACCGGCCAGCTACCCAAATTTG CTGAAGACATGTTCAAGGTTGAGGGACGCGAGCTTTACATGGTTCCGACAGCCGAAGTGCCGTTAACCAACCTTTATCGC GAGGAAATACTGGCTGCAGAACAACTGCCCATGTATTTAACTGCTTACACCGCATGTTTTCGAGCAGAAGCCGGTTCTCA CGGTCGCGACACCAGGGGGATTATCCGCCAACACCAGTTCAACAAGGTAGAGCTCGTAAAGATAACCTCGCCCGAGACAT CTTATGAAGAGCTGGAGAAGCTGACCCGGGATGCGGAGGAGGTACTGCAACTTTTGGGGCTTCCCTACCGCGTAATGCTC CTCTGCACAGGAGACATGGGCTTTTCCTCAGCCAAAACCTATGACCTAGAGGTCTGGCTGCCGAGCTACGGGGAGTATAA GGAAATATCGTCCTGCTCCAACTGTGGGGATTTTCAAGCCCGCAGGGCTAATATCCGTTACCGCCCCGAGCCCAACGCTC GGCCCCAGTTCGTCCACACCTTGAACGGTTCGGGGGTGGCGGTCGGCAGGACAGTGGCCGCGATACTAGAGAATTACCAG CAAGCTGACAGCTCGGTAGTGGTACCAGAGATACTAAGGCCGTACATGGGCGGGATTGCGGTTATTAGATAG Protein sequence : MLDPRLVRANPEMVEKALSARGIQGGLDQFLKLDKERRACQVRADELKNFRNQASVEVGRLKKEGKDTNELQARIREVGQ EIKGLDDRMREIDEQLTEILLNIPNLPHESVPLGAGDADNVEVRRWGEPRKFDFEPQAHWDIGVALDILDFERAAKLSGA RFTVYKGLGARLERALISFMLDLHVDKHGYREVFPPFMVTADCMVGTGQLPKFAEDMFKVEGRELYMVPTAEVPLTNLYR EEILAAEQLPMYLTAYTACFRAEAGSHGRDTRGIIRQHQFNKVELVKITSPETSYEELEKLTRDAEEVLQLLGLPYRVML LCTGDMGFSSAKTYDLEVWLPSYGEYKEISSCSNCGDFQARRANIRYRPEPNARPQFVHTLNGSGVAVGRTVAAILENYQ QADSSVVVPEILRPYMGGIAVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-121 | 58 |
