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Name : Slip_1073 (Slip_1073) Accession : YP_003702416.1 Strain : Syntrophothermus lipocalidus DSM 12680 Genome accession: NC_014220 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1103873 - 1106503 bp Length : 2631 bp Strand : + Note : COGs: COG0249 Mismatch repair ATPase (MutS family); InterProIPR000432:IPR007696:IPR007695:IPR007860:IPR 007861:IPR005748:IPR016151; KEGG: swo:Swol_0974 DNA mismatch repair protein; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain pro DNA sequence : ATGACAAAACTCACGCCGATGATGGAGCAGTACCGGGCTATCAAGGAACAGTACCCGGACTGCATTCTGTTTTTCCGACT GGGCGACTTTTACGAAATGTTTTTCGAAGACGCGGAAATAGCCGCGCAGATACTGGAGATAGTATTGACTGCCAGAGACG GAGGTTCTGGTGTCAAGGTTCCCATGTGCGGGGTTCCCTTCCACGCCGCGGATACCTATATAAGCAGGCTCATCGCCAAG GGTTACCGCGTGGCCATATGCGAACAGGTCGAAGACCCGGCTTTAACCAAAGGCCTGGTCAAGCGGGAAGTGGTACGGGT CATAACGCCGGGGACGGTAGTTGATGTTTCCATGCTGGAGGCAGGAGAAAACAACTACCTGGTTGCCTTGGCGGAGAACG AGTCGGCTATCGGCTTGGCCGTCATCGATGTGTCCACCGGTGATTTTCAGGCAACCGAAGTCAGTGGTCCCGAGGCTTCT TCGCTGGTATTAAGCGAGCTTTACCGGCTCCGCCCCGCCGAGTGTTTGATCCCAGCTTGGACCCAGCGGGAGTCAATACT CTACGAGTTCACGGAAAAGTTTCAGAATTCGGTTGTTACCGAGATGGACCCGACGTACTACCAGTATGCTTGGGCTGAAG CGAAACTCAGGGAATTTTTTGAGGTCGAAGACCTAGTCGAGTTAGGGTTAGAGTCATGCCCGGCAGCGGTGATCGCGGCG GCGGTTATCGTCGCTTTCCTTGAATCGACCTGCCGGGCTCAGTTGAAGCACCTCAGCCGGATCAGGACGTACCAACCCCG TGAGTATTTGGGGTTGGACGTGAACACCCGCCGCAATTTGGAGCTTACGCGCAACTTGAAGGATGGTAAAAGAGAAGGAT CGCTTTTGGCGGTGATCGACTGTTGCCGGACTGCCATGGGACGGAGGCTCCTGCAGAGATGGCTTGAGCAGCCGCTGGTT GACGTGAAGGCCATAAACGAACGCTTGGATGCTGTGGAAGAGATGTACAACTCGTTTTCGTTGCGGGAGAGGATAAGAGA AATTTTGGGAGACGTCCATGATATAGAAAGGCTGGCGGGAAGAATCGGAAGCGGCGTAGCTAGTCCCCGCGAGCTTTTGG CGTTGAAAAATTCATTGATAAATTTGCCCGCTTTTAAGGCTTTGTTACCGGAAGTACGAACTCATCTCTTGAAGAAGATT CTAGAGTTGGATACTCTGGAGGATGTTTACCGGCTATTAGATTCCGTTTTAGACGAGAACGCTCCGGCTTCTATTCGAGA AGGGGGCATCATTAAACCCGGTTGCAACCCGGAAGTGGACGAGCTAAGGAAGCTGGCTTTTGAAGGAAAAGAATGGCTTT TGGAATATGAACAGGGCGAAAGGGAACGAACCGGAATAAAGTCATTGAAGTTAGGGTTCAACCGCGTATTCGGTTACTTT ATAGAAGTAACCAAGCCCAATGTTCACCTGGTTCCGTCCCATTACGTGCGCAAGCAGACCCTGGTCAATGCCGAAAGGTA TATTACGGACGACCTGAAAAACTATGAAGAAAAGGTCCTCAGCGCCAGGGAAAGGTTGGTTCTTCTGGAACAGGAGCTTT TTCAGGTTTTGCGCGAAGAAGTGGCCTGCCACGTTTCACGTTTGCAGGAGGTAGCAGGTGCACTTGCTAAACTCGATGTT ATAGCATGCCTGGCTGAGACCGCTTTCCGTCACGACTACGTACGACCCTTGGTGGACGATTCGGATGTCATTTTTGTTAA GAATGGCCGGCACCCGGTGGTGGAAAGGTTTTTGGGAAGCGAGAGCTTCGTTCCCAACGATACCTATCTCGACGATAAGG AACGTCGGTTGGCTATCATTACCGGTCCCAACATGGGCGGCAAAAGCACCTATATGCGCCAAGTGGCACTTATTACCATC TTGGCGCAGGTAGGAAGCTTCGTACCGGCCACAGAAGCCCGTATAGGGGTTGTTGACCAGGTGTTTACGAGGGTCGGGGC CTCCGATGACCTCGTGGGCGGTCAGAGCACGTTTATGGTAGAAATGGTGGAGGTTGCCCATATCTTAAAAAACGCTACTC GAAAGAGTCTGGTTATTTTGGACGAGATCGGCAGGGGTACGAGCACGTTTGATGGAATGAGTATAGCGCAGGCAGTGTTG GAGCACATATGTAGCCATATAGGAGCCAAAACCCTTTTTGCAACTCATTACCACGAGCTGACCGGATTGGATGAAGTATT GCCCGGCGTTTTCAACCTGTCGGTTTCCGTTAAAGAAAGCGCAGGGGCCGTGATTTTCTTGAAAAAAGTAATCCCGGGCA GGGCGGATAAAAGTTATGGTATCCAGGTTGCGGGGTTGGCCGGCCTGCCAGTTGGGGTCATACAGAGGGCAGGAGAGATA CTGAGAAGTCTGGAGAGCAAAGGAGGCGTCGATAAAGTCGAAGCGATTAACGCGTCCAACGTTGTCCAGCTCGCTTTGTT TCAGGAAGAGCACCCGCTGGTGGAAGAACTTAAACAGCTAGAGCTGGATGACATGACACCGCTTGAGGCTCTGCAGTTGT TGTATCGGTGGCGCGAACAGCTGGTGGCGCCCAGCAAGAAGGGAAAGAGGAACAAGCGAGGAGGTGGTTGA Protein sequence : MTKLTPMMEQYRAIKEQYPDCILFFRLGDFYEMFFEDAEIAAQILEIVLTARDGGSGVKVPMCGVPFHAADTYISRLIAK GYRVAICEQVEDPALTKGLVKREVVRVITPGTVVDVSMLEAGENNYLVALAENESAIGLAVIDVSTGDFQATEVSGPEAS SLVLSELYRLRPAECLIPAWTQRESILYEFTEKFQNSVVTEMDPTYYQYAWAEAKLREFFEVEDLVELGLESCPAAVIAA AVIVAFLESTCRAQLKHLSRIRTYQPREYLGLDVNTRRNLELTRNLKDGKREGSLLAVIDCCRTAMGRRLLQRWLEQPLV DVKAINERLDAVEEMYNSFSLRERIREILGDVHDIERLAGRIGSGVASPRELLALKNSLINLPAFKALLPEVRTHLLKKI LELDTLEDVYRLLDSVLDENAPASIREGGIIKPGCNPEVDELRKLAFEGKEWLLEYEQGERERTGIKSLKLGFNRVFGYF IEVTKPNVHLVPSHYVRKQTLVNAERYITDDLKNYEEKVLSARERLVLLEQELFQVLREEVACHVSRLQEVAGALAKLDV IACLAETAFRHDYVRPLVDDSDVIFVKNGRHPVVERFLGSESFVPNDTYLDDKERRLAIITGPNMGGKSTYMRQVALITI LAQVGSFVPATEARIGVVDQVFTRVGASDDLVGGQSTFMVEMVEVAHILKNATRKSLVILDEIGRGTSTFDGMSIAQAVL EHICSHIGAKTLFATHYHELTGLDEVLPGVFNLSVSVKESAGAVIFLKKVIPGRADKSYGIQVAGLAGLPVGVIQRAGEI LRSLESKGGVDKVEAINASNVVQLALFQEEHPLVEELKQLELDDMTPLEALQLLYRWREQLVAPSKKGKRNKRGGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 4e-134 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Slip_1073 | YP_003702416.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 8e-147 | 42 |
