Gene Information

Name : Arch_0784 (Arch_0784)
Accession : YP_003697133.1
Strain : Arcanobacterium haemolyticum DSM 20595
Genome accession: NC_014218
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 888757 - 889983 bp
Length : 1227 bp
Strand : -
Note : COGs: COG2801 transposase and inactivated derivatives; InterPro IPR012337:IPR001584:IPR002514; KEGG: cur:cur_1459 transposase for insertion sequence; PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; SPTR: Q8RMK1 transposase subunit

DNA sequence : 
ATGAAATTTGATCAGGAAGCGAAGGATCGGGTTGTCCGGTTGGTGGAGGATCGGATCCTTGCTGAGGGGCTCTCGATTCA
GCAAGCTTGTCAGGTAGTCGCGCCCAAGCTTGGGGTTTCGTGGCACACTGCCCGGCAATGGTTACAGCAAGCACGCAAAA
CCGGTCAGGTCACAAGGGCTGAGGAAGACCTGGTTGCTGAGAATGCTCGGCTACGCCGGGAGAATCAAGAACTGCGTGAC
ACGAACGAGTTGTTGAAGGCCGCGTCGGCTTTTTTCGCGTCAGAACCAGGCCCCCAACGTCCGTATTTGATCGCGTTTAT
TGACGAGTATCGTGATCGTTTCTCGGTTGAGTTCATCTGTAAGACGTTAAATGAGCAACGTCAGGGAGGCTTCATCACTT
CCCGCGGCTATCGTAACGCTAAGTATGGTACGCCGAGCGCTAGGAGCATCCGGGACCGTGAGCTGGTTGCCAAGGTTCTC
CAGATACATGGGGAGAACTATGGTGTCTACGGTGTGCGGAAAATGTGGCACGCGCTCTGCCGTTGCGGCCTCGCGGTTGG
CCGCGAGCAGACCGCGAGGCTCATGCGTCTGGCAGGAGTATCCGGGAAAGGCAAGGGACGTTCCCCGATCACGACACGCA
AAGCCCGGAGGGAAGATACCAGGCCAGATTTGGTTCATCGCGAGTTTCACGCCGCGGGTCCGAACCGGCTGTGGGTCGCG
GACATTACTTATGTTCGAACCGCTCAAGGGTTCGTTTACTCGGCGTTTGTGACGGACGTGTTCTCTCGTAAGATTGTGGG
CTGGGCACTATCAGATTCGATGCGGACCGAAGCGTTACCGTTGCAGGCGTTGAATCAGGCGATCACGAGCGCGAAGGAAA
CGGCCGGGGTGATTCATCACTCAGACCACGGATCGCAGTATGTGTCGATTGCGTATAACGATCGGCTCACCGCTGCGGGT
ATCACTCCATCAACCGGGACGGTTGGGGATTCCTACGACAACGCACTAGCCGAGAACGTCAACGGCTCATATAAGAACGA
GCTGATCAATAACCATCGATGGAAAGACGTTCTTGAGGTCGAGATCGCTACCTTCGAATGGGTGACCTGGTGGAACCAGA
CCCGGCTCCACCAAGCCCTTGACTACCGCACCCCGGTCGAGGTTGAGAACGACTACTGGCGCATCGCGAGCACATCAGAG
AAAATGAAAACCAGGGCAAACGCCTAG

Protein sequence : 
MKFDQEAKDRVVRLVEDRILAEGLSIQQACQVVAPKLGVSWHTARQWLQQARKTGQVTRAEEDLVAENARLRRENQELRD
TNELLKAASAFFASEPGPQRPYLIAFIDEYRDRFSVEFICKTLNEQRQGGFITSRGYRNAKYGTPSARSIRDRELVAKVL
QIHGENYGVYGVRKMWHALCRCGLAVGREQTARLMRLAGVSGKGKGRSPITTRKARREDTRPDLVHREFHAAGPNRLWVA
DITYVRTAQGFVYSAFVTDVFSRKIVGWALSDSMRTEALPLQALNQAITSAKETAGVIHHSDHGSQYVSIAYNDRLTAAG
ITPSTGTVGDSYDNALAENVNGSYKNELINNHRWKDVLEVEIATFEWVTWWNQTRLHQALDYRTPVEVENDYWRIASTSE
KMKTRANA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 4e-110 72
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 1e-46 44
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-47 44
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 1e-47 44
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 1e-47 44
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 1e-47 44
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 5e-48 44
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-48 44
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 1e-48 44
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-48 44
Z1198 NP_286733.1 transposase Not tested TAI Protein 7e-47 44
Z1638 NP_287141.1 transposase Not tested TAI Protein 7e-47 44
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 1e-45 44
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 7e-48 44
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-48 44
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-48 44
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 7e-47 43
Z1221 NP_286756.1 transposase Not tested TAI Protein 5e-47 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_0784 YP_003697133.1 integrase catalytic subunit VFG1602 Protein 8e-46 44