Gene Information

Name : Arch_0738 (Arch_0738)
Accession : YP_003697089.1
Strain : Arcanobacterium haemolyticum DSM 20595
Genome accession: NC_014218
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 838608 - 839408 bp
Length : 801 bp
Strand : -
Note : COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transporters ATPase components; InterPro IPR017871:IPR003593:IPR003439; KEGG: cdi:DIP0585 iron transport system ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase; SPTR: Q6NJ28 iron transporter

DNA sequence : 
GTGGATTCTGGAGTGATTGAGTGTGCAGGTTTGTCTGCAGGGTACGGTAACGTTCAGGTTCTTCACGACGTCGATGTGAC
TATTCCTGCCGGAAAAGTCACTGCGTTGATTGGGCCAAATGGGTGTGGAAAATCGACCCTGTTGCGCGTGCTGGGTAGGC
AGCTAGGTATTCAGAGTGGTTCAGTGACGTTACGTGGAGCCGCTGTTGATAGCTTTCCTGCGCGTGACTTTGCGCGGATT
TTATCCTTTTTGCCTCAGCAACCGAGTGTGCCGGAAGGAATGACTGTGCGCGAGCTCATTGCGTTTGGCCGGTACCCATA
CACCGGCGCTTTCGCGTCGTTATCCCCTACCGATCAGGATATTATCGACCAGGCTGCGGCGCAGGCGAACGTCGTCGATT
TTCTGGATTCTCCAGCCATGGTACTTTCGGGCGGACAACGGCAACGGATGTGGATTGCCATGACCTTAGCACAGCAAACA
GACATCATGCTGCTCGATGAGCCCACAACATATCTTGATCCCGCGCATCAATTAGCGATTCTGGATTTGGTGTCTGATCT
GAATCAGCAAGGGCGCACAGTTGTGATGGTGATTCACGATATGGCTCATGCAGCAAAGTATTCAGATCACGTTGTTGTGA
TGAAAGAAGGCCATGTGCTTGCGCAAGGGCCTACTGAGCAGACGCTTACTGCGGATGTCATCGCACAAGCGTTCGGAATT
GCAACTGTCATGGTGACCGATCCAATCACACAGCGGCAACTACCCATCGCCTATTCTGCCAGTGGAAGCACAGCATTATA
G

Protein sequence : 
MDSGVIECAGLSAGYGNVQVLHDVDVTIPAGKVTALIGPNGCGKSTLLRVLGRQLGIQSGSVTLRGAAVDSFPARDFARI
LSFLPQQPSVPEGMTVRELIAFGRYPYTGAFASLSPTDQDIIDQAAAQANVVDFLDSPAMVLSGGQRQRMWIAMTLAQQT
DIMLLDEPTTYLDPAHQLAILDLVSDLNQQGRTVVMVIHDMAHAAKYSDHVVVMKEGHVLAQGPTEQTLTADVIAQAFGI
ATVMVTDPITQRQLPIAYSASGSTAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-85 70
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-85 70
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-85 70
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-85 70
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-88 69
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-50 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-51 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-43 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-43 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-43 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-43 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-50 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_0738 YP_003697089.1 ABC transporter BAC0164 Protein 3e-51 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_0738 YP_003697089.1 ABC transporter VFG1042 Protein 2e-51 44
Arch_0738 YP_003697089.1 ABC transporter VFG0925 Protein 1e-49 41