Gene Information

Name : Arch_0060 (Arch_0060)
Accession : YP_003696446.1
Strain : Arcanobacterium haemolyticum DSM 20595
Genome accession: NC_014218
Putative virulence/resistance : Unknown
Product : glycerophosphoryl diester phosphodiesterase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0584
EC number : -
Position : 88960 - 89703 bp
Length : 744 bp
Strand : +
Note : COGs: COG0584 glycerophosphoryl diester phosphodiesterase; InterPro IPR004129:IPR017946:IPR000909; KEGG: pac:PPA1839 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: D0YTV4 glycerophosphoryl diester pho

DNA sequence : 
ATGAAACATTCGTTGTTGAAAAGGCAGGTCATCGCCCACCGCGGCCTGAACCGTCTTGCGCCAGAAAACACGCTGGCTGC
TTTCCGTTTAGCGGCAGAACACGGATGCCAATGGATCGAAACCGATGTTGACATCCTCAAAGACGGCACGCCAATCATCA
TGCATGATACGCTCCTTGACCGCACAACGAACGCCACCGGCTATTTCTACGATCTTGACTCAACCGACGTCGCCAACATC
GACGCCGGATCCTGGTTCTCGTCACAGTATGCTGGCGAACCCATCCCAACTCTCCGCCAGTTGGTTGACCTTATGAACGA
AACTGGCCTTAACGCAAACATCGAACTCAAATCGAATGAACGCGGCAAAGCAACATCGATGCAGCTCATCGATAACACAC
TCGCAGAACTCGATCGGCTTGATCCGGAGCGCGAGATCATTATTTCCTCGTTCAATCACCTACTTTTGCACCACGTCCAT
GAAGCACGCCCAGACATCCCCATCGGCGCGCTCTTCGTTGTAGACAACCTGTGGGAAGATTGGAAATCCATCCTCGAACT
CGTAGGCGCCACCTACATTCACCCTGAAGATGCAGGCCTCACCCCGCACAAAGTCGCGGCATTCCGCGAAGCCGGTTATG
GCGTAAACGTCTGGACGGTGAACGGAAAAGACCGCGCCAACGAACTCTTCAATTGGGGTGTGACCGGCGTTTTCACCGAT
ATCGCTAACGAATTCCGTCAGTAA

Protein sequence : 
MKHSLLKRQVIAHRGLNRLAPENTLAAFRLAAEHGCQWIETDVDILKDGTPIIMHDTLLDRTTNATGYFYDLDSTDVANI
DAGSWFSSQYAGEPIPTLRQLVDLMNETGLNANIELKSNERGKATSMQLIDNTLAELDRLDPEREIIISSFNHLLLHHVH
EARPDIPIGALFVVDNLWEDWKSILELVGATYIHPEDAGLTPHKVAAFREAGYGVNVWTVNGKDRANELFNWGVTGVFTD
IANEFRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAG06197.1 glycerophophory diester phosphodiesterase Not tested Type-VII SCCmec Protein 2e-39 42
ugpQ BAB47627.1 glycerophosphoryldiester phophodiesterase Not tested Type-III SCCmec Protein 2e-39 42
MW0029 NP_644844.1 hypothetical protein Not tested Type-IV SCCmec Protein 3e-39 42
ugpQ BAC57476.1 glycerophosphoryl diester phosphodiesterase homolog Not tested Type-IIIinv SCCmec Protein 2e-39 42
SAV0039 NP_370563.1 glycerophosphoryl diester phosphodiesterase-like protein Not tested Type-II SCCmec Protein 3e-39 42
unnamed BAB72116.1 hypothetical protein Not tested Type-IVa SCCmec Protein 2e-39 42
SA0036 NP_373276.2 hypothetical protein Not tested Type-II SCCmec Protein 3e-39 42
unnamed BAB72135.1 hypothetical protein Not tested Type-IVb SCCmec Protein 2e-39 42
SAPIG0040 YP_005732850.1 glycerophosphoryl diester phosphodiesterase Not tested Type-V SCCmec Protein 3e-39 42
unnamed BAC67569.1 hypothetical protein Not tested Type-IVc SCCmec Protein 2e-39 42
SAUSA300_0030 YP_492750.1 putative glycerophosphoryl diester phosphodiesterase Not tested Type-IV SCCmec Protein 3e-39 42
unnamed BAA82224.2 glycerophosphoryldiester phosphodiesterase Not tested Type-II SCCmec Protein 2e-39 42
SERP2523 YP_190064.1 glycerophosphoryl diester phosphodiesterase UgpQ Not tested Type-II SCCmec Protein 3e-39 42
SACOL0031 YP_184942.1 glycerophosphoryl diester phosphodiesterase Not tested Type-I SCCmec Protein 3e-39 42
unnamed BAD24824.1 glycerophophory diester phosphodiesterase homolog Not tested Type-V SCCmec Protein 2e-39 42
SH0089 YP_252004.1 hypothetical protein Not tested SCCmec Protein 3e-39 42
ugpQ YP_039513.1 glycerophosphoryl diester phosphodiesterase Not tested Type-II SCCmec Protein 3e-39 42
unnamed ACL99836.1 glycerophosphoryl diester phosphodiesterase- like protein Not tested Type-V SCCmec Protein 2e-39 42
ugpQ BAA86651.1 glycerophosphoryl diester phosphodiesterase homologue Not tested Type-I SCCmec Protein 2e-39 42
SAMSHR1132_00300 YP_005324554.1 glycerophosphoryl diester phosphodiesterase Not tested Type-IIIinv SCCmec Protein 3e-39 42