Gene Information

Name : Arch_0507 (Arch_0507)
Accession : YP_003696872.1
Strain : Arcanobacterium haemolyticum DSM 20595
Genome accession: NC_014218
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 591348 - 592202 bp
Length : 855 bp
Strand : +
Note : COGs: COG2801 transposase and inactivated derivatives; InterPro IPR001584:IPR012337; KEGG: cur:cur_1459 transposase for insertion sequence; PFAM: Integrase catalytic region; SPTR: B1VGV7 transposase for insertion sequence; PFAM: Integrase core domain

DNA sequence : 
ATGAGCAACGTCAGGGAGAGTGTCATCACTTCCCGCGGCTATCGTAACGCATATGGTACGCCGAGCGCTAGGAGCGTCTG
GGACCGTGAGCTGGTTGCCAAGGTTCTCCAGATCCATGGGGAGAACTATGGTGTCTACGGTGTGCGGAAAATGTGGCACG
CGCTCTCCCGCCGTGGCGTGCGGGTCGGCCGCGAGCAGACCGCGAGGCTCATGCGTCTGGCAGGAGTATCCGGGAAGGGC
AAGGGACGTTCCCCGATCACGACACACAAAGCCCGGAGGGAAGATACCAGACCAGGTTTGGTTCATCGCGAGTTTCACGC
CGCTGGTCCGAACCGGCTGTGGGTCGCGGACATTACTTATGTTCGAACCGCTCAAGGGTTCGTTTATGCGGCGTTTGTGA
CGGACGTGTTCTCTCGCAAGATCGTGGGCTGGGCACTATCAGATTCCATGCGGACCGAGGCATTACCGTTGCAGGCGTTG
AATCAGGCGATCACGAGCGCGAAGGAAACGGCCGGGGTGATACATCACTCAGACCACGGATCGCAGTATGTGTCGATTGT
GTATAACGATCGGCTCACAGATGCTGGTATCACTCCATCAACCGGGACGGTTGGGGATTCCTACGACAACGCACTAGCCG
AGAACGTCAACAGCTCATATAAGAACGAGCTGATCAATAACCATCGATGGAAAGACGTTCTTGAGGTCGAGATCGCTACC
TTCGAATGGGTGACCTGGTGGAACCAGACCCGGCTCCACCAAGCCCTTAACTACCGCACCCCGGTCGAGGTTGAGAACTA
CTACTGGCGCATCGCGAGCACATCAGAGAAAATGAAAACCAGGGCAAACGCCTAG

Protein sequence : 
MSNVRESVITSRGYRNAYGTPSARSVWDRELVAKVLQIHGENYGVYGVRKMWHALSRRGVRVGREQTARLMRLAGVSGKG
KGRSPITTHKARREDTRPGLVHREFHAAGPNRLWVADITYVRTAQGFVYAAFVTDVFSRKIVGWALSDSMRTEALPLQAL
NQAITSAKETAGVIHHSDHGSQYVSIVYNDRLTDAGITPSTGTVGDSYDNALAENVNSSYKNELINNHRWKDVLEVEIAT
FEWVTWWNQTRLHQALNYRTPVEVENYYWRIASTSEKMKTRANA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 3e-95 70
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 6e-52 54
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 5e-39 49
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 5e-39 49
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-46 49
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-46 49
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 7e-47 48
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 7e-37 48
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-46 48
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 1e-46 48
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-46 47
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-46 47
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-46 47
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 3e-46 47
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-46 47
Z1198 NP_286733.1 transposase Not tested TAI Protein 7e-46 47
Z1638 NP_287141.1 transposase Not tested TAI Protein 7e-46 47
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-46 47
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 1e-46 47
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-45 46
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 5e-46 46
Z1221 NP_286756.1 transposase Not tested TAI Protein 4e-46 46
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_0507 YP_003696872.1 integrase catalytic subunit VFG1602 Protein 1e-44 46