Gene Information

Name : Arch_0404 (Arch_0404)
Accession : YP_003696777.1
Strain : Arcanobacterium haemolyticum DSM 20595
Genome accession: NC_014218
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 471483 - 472145 bp
Length : 663 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: cai:Caci_7925 ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA; SPTR: D0YQR1 Lipoprotein releasing system, ATP-binding p

DNA sequence : 
ATGTCTGAAATCCTCAAAGCCACAAATCTGACGAAAACTTACGGATCCACCCACGCCATGCGCGGCATATCGCTCGATGT
TTCACGTGGTGAAGCGCTCGCGATCATGGGCCCATCGGGCTCAGGAAAATCAACGCTCCTCCATGCGCTGGCTGGCATCG
AACTCCCAGATAGCGGCACAGTTTCGTTCAACGGCCTGGAACTGACCACGATGTCCGATGCGGAGCGCACAATCCTGCGC
CGCCGCGATTTTGGGTTTGTGTTCCAGTTCAGCCAACTCGTCCCGGAACTAACAGCGCTCGATAACGTGGCGGTCCCGCT
TTTGCTTGACGGCATGGCTAAGTCCAAGGCCTACTATCAGGCGGCAGAATGGCTGGAAAAGGTGGGGCTGTACGATCATG
CGCAGTCGCTCCCCGGCCAGCTGTCTGGCGGCGAAGCCCAGCGCGTGGCCATCGCCCGTGCCTTGTGCCCAAAGCCGTCA
GTGCTGTTCGCGGATGAGCCAACGGGCGCGCTCGATTCCCTCAATTCGGAAAGCGTGATGACCATGTTTATGGATATTGC
CCGCAACACTGGCATGACCGTTGTGATGGTCACCCATGAACCGCTGATCGCTGCCTATGCCGATCGTGAAGTGATCGTGC
GTGACGGCTTGTTGGAAGGATGA

Protein sequence : 
MSEILKATNLTKTYGSTHAMRGISLDVSRGEALAIMGPSGSGKSTLLHALAGIELPDSGTVSFNGLELTTMSDAERTILR
RRDFGFVFQFSQLVPELTALDNVAVPLLLDGMAKSKAYYQAAEWLEKVGLYDHAQSLPGQLSGGEAQRVAIARALCPKPS
VLFADEPTGALDSLNSESVMTMFMDIARNTGMTVVMVTHEPLIAAYADREVIVRDGLLEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-30 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_0404 YP_003696777.1 ABC transporter CP001581.1.gene798.p Protein 1e-39 46
Arch_0404 YP_003696777.1 ABC transporter CP001581.1.gene598.p Protein 2e-36 44
Arch_0404 YP_003696777.1 ABC transporter NC_008702.1.4606598. Protein 2e-31 44
Arch_0404 YP_003696777.1 ABC transporter NC_012469.1.7686878. Protein 2e-41 43