Gene Information

Name : Arch_0227 (Arch_0227)
Accession : YP_003696607.1
Strain : Arcanobacterium haemolyticum DSM 20595
Genome accession: NC_014218
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 269213 - 271834 bp
Length : 2622 bp
Strand : +
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR004176:IPR003959:IPR001943:IPR 013093:IPR019489:IPR001270:IPR018368; KEGG: xce:Xcel_0363 ATPase AAA-2 domain protein; PFAM: ATPase AAA; Clp domain protein; ATPase AAA c

DNA sequence :
TTGTTTGAAAGGTTCACTGACCGCGCACGTAGAGTGATCGTGCTTGCGCAGGAAGAGGCACGTAACCTCAAGCACAACTA
CCTTGGCACTGAACACATTCTGCTTGGCCTGATTAAGGAAGGCGAAGGCGTGGCCGCGAAGGCACTGGAAGCACTGGGTG
TTTCGTTTGATGCCGTTCGTGATCAGGTTGTGGAAATTATTGGTGAGGGGCAGGAACAGCCATCTGGACATATTCCATTC
ACTCCGCGTGCCAAGAAGGTGTTGGAATACGCGATGCGTGAAGGCCTCCAACTGGGCCATTCCTACATTGGTACGGAACA
CTTGCTGTTGGGCTTATGCCGCGAACAGGAAGGCGTTGCTGCACAGGTGTTGGTGAAGCTGGATGCTGATTTGCCGAAGG
TGCGCCAGCAGGTTACTCAGCTTCTTTCTGGTTACCAGGGCAAGGAAGCTGTTGGCGTTGGTGGCGGTGGCCCGCGTGAA
GGCGTGAAGGCTGGTTCTACGATTTTGGATCAGTTTGGCCGGAATCTTACGCAGTCTGCGCGTGAAAACAAGCTTGATCC
GGTGATTGGCCGCCACATGGAAACTCAGCGTGTGATGCAGGTTCTCTCCCGCCGAAACAAGAACAACCCTGTTCTGATTG
GTGAACCGGGGGTTGGTAAGACTGCCGTTGTGGAAGGATTGGCTCAGGCGATTGCGCATGGTGATGTTCCTGAAACCTTG
AAGGATAAGCAGTTGTATTCGCTGGATATGGGTTCGCTGGTTGCGGGTTCCCGGTATCGTGGCGATTTCGAAGAGCGTAT
GAAGAAGATCTTGAAGGAGATCAATACGCGCGGCGATATCGTGCTGTTTATTGATGAAATCCATACGCTTGTTGGTGCGG
GTGCGGCGGAAGGCGCGCTGGATGCGGCGTCGCTGTTGAAGCCGATGATGGCCCGTGGCGAACTTCAGGTGATTGGTGCT
ACCACGCTTGATGAATACCGTAAGCATATTGAAAAAGATGCTGCGTTGGAGCGCCGTTTCCAGCCTATCCAGGTGGAGCA
GCCGTCTGTTAAGGAAACGATCGCGATTCTGGAAGGTTTGCGCGATCGCTATGAAGCGTTCCATCGCGTGACCATCACTG
ACGAAGCTTTGGAAGCCGCTGCCACCATGGCAGATCGGTACATTAATGATCGGTTCTTGCCGGATAAGGCAATCGATTTG
ATTGATGAAGCCGGTGCTCGGTTGGCGATTCGGAAGATGACTGCGCCACCAGAACTGCGTGAGCTTGATGAAGAAATCGC
TGATGTGAAGCGCCAGAAGGAAGCTGCTATTGATGGGCAGGATTTCGAAAAGGCTGCTGCATTGCGCGATCAGGAGCAAC
AGTTGACTGAAAAGCGTGCCGAACGTGATAAGGCATGGCGTGAAGGTGATCTGGATGTTGTTGCCGTGGTCGATGAGGAT
CTGATTTCTGAAGTCCTCTCTATGGCTACTGGTATCCCGGTGTTCAAGTTGACTGAAGCCGAATCTGCCAAGTTGCTGCG
TATGGAAGAAGAGCTCCATAAGCGTGTTATTGGCCAGAGCGAAGCGGTTACTGCTCTTTCGCAGGCGATTCGCCGTACGC
GCGCTGGTTTGAAGGATCCAAACCGTCCAGGTGGTTCGTTTATTTTTGCTGGCCCAACTGGTGTTGGTAAAACCGAATTG
GCTAAGGCATTGGCTGAATTTCTGTTCGGTGATGAAGATGCGTTGATTACCTTAGATATGTCTGAGTTCCAGGAAAAGCA
CACTGTTTCGCGCTTGTTCGGTGCCCCTCCGGGATATGTTGGCTACGATGAAGGTGGCCAGTTGACCGAGAAGGTCCGCC
GTAAGCCGTTCTCTGTTGTTTTGTTCGATGAGGTGGAAAAGGCTCACCAGGATCTGTTCAATTCGTTGTTGCAGATTTTG
GAAGAAGGCCGTTTGACTGATTCTCAGGGCCGCGTGGTGGACTTCAAGAACACGGTGATTATCATGACCACCAACTTGGG
TACCAAGGACATCGCCAAGGGCGTGGCCACTGGTTTCCAGTTTGACGGGGATCAAACTAGCTCTTACGAACGCATGAAAT
TGCGTGTGAACGATGAGTTGAAGAACCACTTCCGCCCAGAGTTCTTGAACCGTGTTGATGACATCATCGTGTTCCCGCAG
CTCCAGAAGCCAGAAATCTTGCAGATCGTGGATCTGATGATTGCCAAATTGGGTGCTCGTTTGGCTGATCAGGGCATGGG
CATTGTGCTTACTGATAAGGCAAAGAACCTGCTTGCTGATCGTGGTTACGATCCAGTGTTGGGCGCGCGACCATTGCGCC
GTGCAATCCAGCGCGATATTGAAGATGAGCTCTCGGAGAAGCTGCTCTTTGGCGAGTTCCGTAGTGGGCAGACCATCGTT
GTGGACGTGAATGAAGACAACATTCCAATGTCCTTCACATTCACGGGCCAGGATTCGGATTATCGCCTGCCAGAGGGCGT
GCAGCCGGCTCCAGAAGCGGCAGAGATCAACGGATTGGCTCAGCCAACTACGATCGTGCCGGAAGGCGATGCGGCTGAAG
ATGCTGAGGGTGCTTCTGACGTTCACAGGCCGGACCCTGGCACGTCTACGCTTGAATCCTAA

Protein sequence :
MFERFTDRARRVIVLAQEEARNLKHNYLGTEHILLGLIKEGEGVAAKALEALGVSFDAVRDQVVEIIGEGQEQPSGHIPF
TPRAKKVLEYAMREGLQLGHSYIGTEHLLLGLCREQEGVAAQVLVKLDADLPKVRQQVTQLLSGYQGKEAVGVGGGGPRE
GVKAGSTILDQFGRNLTQSARENKLDPVIGRHMETQRVMQVLSRRNKNNPVLIGEPGVGKTAVVEGLAQAIAHGDVPETL
KDKQLYSLDMGSLVAGSRYRGDFEERMKKILKEINTRGDIVLFIDEIHTLVGAGAAEGALDAASLLKPMMARGELQVIGA
TTLDEYRKHIEKDAALERRFQPIQVEQPSVKETIAILEGLRDRYEAFHRVTITDEALEAAATMADRYINDRFLPDKAIDL
IDEAGARLAIRKMTAPPELRELDEEIADVKRQKEAAIDGQDFEKAAALRDQEQQLTEKRAERDKAWREGDLDVVAVVDED
LISEVLSMATGIPVFKLTEAESAKLLRMEEELHKRVIGQSEAVTALSQAIRRTRAGLKDPNRPGGSFIFAGPTGVGKTEL
AKALAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHQDLFNSLLQIL
EEGRLTDSQGRVVDFKNTVIIMTTNLGTKDIAKGVATGFQFDGDQTSSYERMKLRVNDELKNHFRPEFLNRVDDIIVFPQ
LQKPEILQIVDLMIAKLGARLADQGMGIVLTDKAKNLLADRGYDPVLGARPLRRAIQRDIEDELSEKLLFGEFRSGQTIV
VDVNEDNIPMSFTFTGQDSDYRLPEGVQPAPEAAEINGLAQPTTIVPEGDAAEDAEGASDVHRPDPGTSTLES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 71
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 7e-88 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_0227 YP_003696607.1 ATPase AAA VFG0079 Protein 0.0 59
Arch_0227 YP_003696607.1 ATPase AAA VFG0080 Protein 5e-153 53