Gene Information

Name : Arch_0180 (Arch_0180)
Accession : YP_003696562.1
Strain : Arcanobacterium haemolyticum DSM 20595
Genome accession: NC_014218
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 219597 - 222206 bp
Length : 2610 bp
Strand : +
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR004176:IPR003959:IPR013093:IPR 019489:IPR017730:IPR001270:IPR018368; KEGG: bcv:Bcav_3653 ATP-dependent chaperone ClpB; PFAM: ATPase AAA; ATPase AAA central domain prote

DNA sequence :
ATGGATAAGTTCACAACAAAATCCCAAGAGGCGCTCGCAGACGCTATCGAGATGGCCACCCGTGCCGGAAATCCGCACGT
TGAACCGGCCCACTTGCTGACGTCACTAGTAACACAAACCGGCGGAGTCGCGCGCGCTCTTCTCGACGCGGTTGGCGCAG
ACGCCGCCCAAATCTCGCAGCGCGCTAAAGCACATGTCGCCACTTTGCCGGGCATGCAGGGTCAGTCTGCCGCGCAACCG
CAGGCCTCGCGGCAGCTGAGTCTTGTTTTGTCGGATGCCGGCAAGGAAGCCACGGCTCTGGGGGATGCCTATATTTCTAC
CGAGCATCTGTTGCTCGCGCTCGCGAATAGTCAAAGCGCGGCCGGGGATATTTTGCGTTCTGCGGGCGCGAACCGCGATC
AGCTGAATGCGGCTTTGCCGAACGTGCGAGGAAATCAGCGGGTGACTTCGCCGGATCCGGAGGGCACGTTCAAAGCTTTG
GAGAAGTATGGGTCGGATCTGACTCAGATGGCGCGGGATGGCAAGCTGGATCCGGTGATTGGCCGCGATTCGGAGATTCG
CCGCGTGGTTCAGGTGTTGAGCCGCCGCACGAAGAACAATCCGGTGTTGATTGGTGAACCTGGTGTGGGTAAAACTGCGG
TCGTTGAGGGGCTCGCGCAGCGTATTGTTGATGGTGATGTGCCGGAGTCTTTGCGTGGTAAGCGGCTGATTTCGTTGGAT
ATTTCTGCGATGGTTGCGGGCGCGAAGTATCGTGGCGAGTTTGAGGAACGGTTGAAGGCGGTTCTTCAGGAGATCAAGGA
TTCCGACGGCGAAGTGGTCACCTTCATTGATGAGTTGCATACCGTTGTGGGTGCCGGTGGTGGTGCTGATGGTGCGATGG
ATGCTGGGAATATGTTGAAGCCGATGTTGGCTCGTGGGGAGTTGCGTCTTGTTGGTGCAACGACTTTGGATGAGTATCGG
GAGCATATTGAGAAGGATCCTGCGTTGGAGCGTCGTTTCCAGCAGATTTTTGTTGGCGAACCGTCGGTTGAAGATACTGT
GGCGATTTTGCGTGGTATCGCTCCGAAGTACGAGGCTCACCATAAGGTAACTATTTCTGATGGTGCGTTGGTGGCTGCGG
CCACCTTGTCGGATCGCTATATTTCTGGCCGTCAATTGCCAGATAAGGCGATTGATCTGGTGGATGAGGCGGCGTCTCGG
CTTCGGATGGAGTTGGATTCTTCTCCGGAGGAGATTGATGTTCTTCAGCGGCAGGTTGATCGTTTGAAGATGGAAAAGTC
GTATCTTGAGGAGACTGACGATCAGTCGGATCTCGCCGCTCAGGATCGACTTGAACGTCTTGTTGCCGAGTTGGCGGATA
AGTCTGAGGAGCTGGCTGCGTTGAATGCGCGGTGGGAAGCTGAAAAGGCTGGCCGTAACAAGGTTGGCGATTTGCGTGTG
CGGCTTGATGAACTGCGTACGGAGTTGGAGAAAGCGATTCGTGAGGGCCGTTATGAGGATGCGGGACGTTTGCAGAATGG
TGATATTCCGCAGGTGGAAGCGCAGATCGCGGCGGGTGAAGCGGATGAACAGCAGCCGTCTGATACGCCTCCGATGATTG
CTGAGAAGGTGGATGCGGATGGGATTGCGGAAGTGATCGCGTCCTGGACTGGGATCCCGGTTGGTCGCCTGATCCAGGGG
GAAACTGAGAAACTGCTCACCATGGAGGAGCATATCGGCCAGCGTCTGATTGGTCAGCGCGCGGCGGTTCGTTCGGTGTC
TGACGCGGTGCGCCGTTCGCGCGCAGGCGTGGCAGATCCGAATCGCCCCACGGGCTCATTCCTGTTCCTTGGCCCCACGG
GCGTTGGTAAGACTGAGCTCGCGAAGTCCTTGGCTGATTTCCTTTTCGACGACGAACGCGCCATGGTCCGCATCGACATG
TCCGAATACTCGGAGAAGCATTCCGTGGCTCGCCTCGTAGGTGCCCCTCCGGGATACGTGGGATATGAGGAAGGCGGCCA
GCTCACTGAGGCTGTGCGCCGCCGCCCATACGGTGTGGTGTTGCTGGATGAAGTTGAGAAGGCACATCCGGAAGTTTTCG
ATATCCTCTTGCAGGTTCTCGACGACGGCCGGTTGACCGACGGCCAAGGCCGCACAGTTGATTTCCGGAACACGATTCTG
ATTTTGACATCGAATCTGGGATCGCAATTCTTAACATCCGGTGATCTGACCGCGGAAGAAAAGCGTGCAGCTGTGATGAA
TGCTGTCCATGGCAACTTTAAGCCAGAGTTCATCAACAGGCTCGATGATCTGATCATCTTCGATCCGTTAAGCGTTGAAG
ATATTGAAAAGATCGTCGATTTGCAGGTGGCTCAACTGGCCAACAGGCTAGCATCGCGCCGAATCTCCCTTGATGTCACG
CGGGCAGCAACCTCAATGCTCACCCTCGACGGCTATGATCCGGCATACGGTGCACGCCCACTTCGCCGCCTAATACAGCG
CGAAATCGGCGATCAGCTCGCACGCATGATCCTAGCCGGAGAAGTAGAAGACGGCACCACCGTCGTCGTCGATGCGAAAG
AAAACGAAACCTTCGAAGGTGACCATCGGCTAACGTTGCACGCGGCGTGA

Protein sequence :
MDKFTTKSQEALADAIEMATRAGNPHVEPAHLLTSLVTQTGGVARALLDAVGADAAQISQRAKAHVATLPGMQGQSAAQP
QASRQLSLVLSDAGKEATALGDAYISTEHLLLALANSQSAAGDILRSAGANRDQLNAALPNVRGNQRVTSPDPEGTFKAL
EKYGSDLTQMARDGKLDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVDGDVPESLRGKRLISLD
ISAMVAGAKYRGEFEERLKAVLQEIKDSDGEVVTFIDELHTVVGAGGGADGAMDAGNMLKPMLARGELRLVGATTLDEYR
EHIEKDPALERRFQQIFVGEPSVEDTVAILRGIAPKYEAHHKVTISDGALVAAATLSDRYISGRQLPDKAIDLVDEAASR
LRMELDSSPEEIDVLQRQVDRLKMEKSYLEETDDQSDLAAQDRLERLVAELADKSEELAALNARWEAEKAGRNKVGDLRV
RLDELRTELEKAIREGRYEDAGRLQNGDIPQVEAQIAAGEADEQQPSDTPPMIAEKVDADGIAEVIASWTGIPVGRLIQG
ETEKLLTMEEHIGQRLIGQRAAVRSVSDAVRRSRAGVADPNRPTGSFLFLGPTGVGKTELAKSLADFLFDDERAMVRIDM
SEYSEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYGVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTIL
ILTSNLGSQFLTSGDLTAEEKRAAVMNAVHGNFKPEFINRLDDLIIFDPLSVEDIEKIVDLQVAQLANRLASRRISLDVT
RAATSMLTLDGYDPAYGARPLRRLIQREIGDQLARMILAGEVEDGTTVVVDAKENETFEGDHRLTLHAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-104 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_0180 YP_003696562.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-116 42
Arch_0180 YP_003696562.1 ATP-dependent chaperone ClpB VFG2084 Protein 5e-105 42