Gene Information

Name : Arch_1145 (Arch_1145)
Accession : YP_003697477.1
Strain : Arcanobacterium haemolyticum DSM 20595
Genome accession: NC_014218
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1286216 - 1287178 bp
Length : 963 bp
Strand : -
Note : COGs: COG0803 ABC-type metal ion transporter periplasmic component/surface adhesin; InterPro IPR006127:IPR006129:IPR006128; KEGG: rop:ROP_70570 manganese ABC transporter manganese-binding protein; PFAM: periplasmic solute binding protein; SPTR: C0VYA0 met

DNA sequence : 
ATGGTTATGAATATCAAGAAGTTCGTGCGTATTGTTCCGGCACTTGTTGCAAGTTGTGCACTCGCTCTCGGCGGATGTTC
AACATCCGAAAAGCCAGCTGCTAAGGCAGAATCGGCCACGTCGTCGTCCACTCAGGAAGATGGCAAACCTGTTGTTCTCA
CAACCTTCACGGTTATCGCAGATATGGTGAATAACGTTGTGGGGGATAAGATGTCCGTCGCTTCGATCACTGAACCGGAT
GCGGAAATCCACGATTATCAGCCAACCCCAGCCGATATTAAGAAAGCTGAAAAAGCGGATCTGATCCTTAATAATGGCCT
GGGCCTAGAGCGTTGGTTTGAACGTTTCGTTGCCGATACTAAGGTGCCGCACTTCGATCTCTCTGAAGGGGTAGAGCCAA
TCGCCATTGCGGAAGGTGATTACGAAGGAAAGCCGAATCCACACGCATGGATGTCTCCTACGGCTGCCCAATTCTACGTC
GATAACATTGTGAAGGCCGTATCTTCCATTGATAAGAAGAACGCGGAATTCTATAAGGAAAACGGCGAAAAATATAAGAA
GGAAATCGCGAGTGTGAAGGAAAAGATGGAATCCGAACTGGCTTCCATTCCGGCTGAACATCGCGCGCTCGTTACCTGCG
AAGGGGCCTTCTCTTATCTCGCTCGTGATATGAAGCTTACGGAAAAGTATCTCTGGGGCGTGAATGCTGAAGGTGCACTT
ACTCCTCAACGTATGGCGGACGTGGAGAACTTTGTGAAGCAATCGAAAGTTCCAGCGGTCTTCTGCGAATCCACTGTTGA
TAACAAGATGAAGCCAGTTGTTGAAGCCACCGGTACACCGTTTGGTGGGGTCCTCTACGTCGATTCCTTATCAGGAGCGG
ACGGTGACGTGCCAACATACCTCGATCTTCTGCGTTACGACGCAGAGACCATCACAAAAGGTTTGACTGGGAAGTCTAAC
TAA

Protein sequence : 
MVMNIKKFVRIVPALVASCALALGGCSTSEKPAAKAESATSSSTQEDGKPVVLTTFTVIADMVNNVVGDKMSVASITEPD
AEIHDYQPTPADIKKAEKADLILNNGLGLERWFERFVADTKVPHFDLSEGVEPIAIAEGDYEGKPNPHAWMSPTAAQFYV
DNIVKAVSSIDKKNAEFYKENGEKYKKEIASVKEKMESELASIPAEHRALVTCEGAFSYLARDMKLTEKYLWGVNAEGAL
TPQRMADVENFVKQSKVPAVFCESTVDNKMKPVVEATGTPFGGVLYVDSLSGADGDVPTYLDLLRYDAETITKGLTGKSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 6e-69 56
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 6e-69 56
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 6e-69 56
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 4e-69 56
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-69 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_1145 YP_003697477.1 periplasmic solute binding protein BAC0349 Protein 3e-69 56
Arch_1145 YP_003697477.1 periplasmic solute binding protein BAC0439 Protein 1e-61 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_1145 YP_003697477.1 periplasmic solute binding protein VFG0525 Protein 2e-69 56