Gene Information

Name : Arch_1144 (Arch_1144)
Accession : YP_003697476.1
Strain : Arcanobacterium haemolyticum DSM 20595
Genome accession: NC_014218
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1285233 - 1285976 bp
Length : 744 bp
Strand : -
Note : COGs: COG1121 ABC-type Mn/Zn transporters ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: rop:ROP_70560 manganese ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C0VYA1 ABC superfamily ATP bindi

DNA sequence : 
TTGAACCTGCAACAAGCTGCACTTGACGTCCAGGGCGTCCACGTCTCATACGGGGATGTCCGTGCCCTTACTGGCATCGA
TTTTTCGATAGGGCCAGGGAAAATCTGCGCGATCGTAGGCATGAACGGTTCGGGTAAATCCACGTTCTTCAAGTCAATCA
TGGGCTTGGTGACAATTTCCCAGGGGACGATCATGGTTTCCGGGCAAGAACCCAAAGTAGCCCGCAAAGCAGGAAAAATT
GGCTATGTTCCACAAAATGAGGAAATCGATCCGCGCTTCCCGCTCTCTATCTATGACGTGGTGATGATGGGGCGCTACGG
GCTGATGGGCCCGCGCCGCAAACCATCCCAAACAGATAAAGATGCCGTGGCGAAGGCTTTAGACGTTGTTGGCCTCACCG
GCCTAGAAAACCGTCCGATCGGCGCTCTGTCTGGCGGGCAACGAAAGCGTGCTTTCGTTGCCCGCGCAGTTGCCCAAGGC
GCAGAAGTCATGCTGCTTGATGAACCATTTGCCGGCGTGGATTTCACGTCTGCCGCTGTGATTACTGAATTGTTGCAACG
GTTAGCGCGTTCGGGCACCACGTTGTTGGTGTCTACGCACGATCTGTCCACCATCCCAGATTTCGCAGATGAAGTGGCCT
TGTTGAACCGCAAGATCGTAGGCAGGGGAGAACCGACAGCCACCTTATCCCAGCACAATCTTGCGTTGGCTTTCACAACA
CCTGAAGCGGAGGACATACGATGA

Protein sequence : 
MNLQQAALDVQGVHVSYGDVRALTGIDFSIGPGKICAIVGMNGSGKSTFFKSIMGLVTISQGTIMVSGQEPKVARKAGKI
GYVPQNEEIDPRFPLSIYDVVMMGRYGLMGPRRKPSQTDKDAVAKALDVVGLTGLENRPIGALSGGQRKRAFVARAVAQG
AEVMLLDEPFAGVDFTSAAVITELLQRLARSGTTLLVSTHDLSTIPDFADEVALLNRKIVGRGEPTATLSQHNLALAFTT
PEAEDIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-46 45
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-46 45
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-46 45
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-46 45
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-46 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_1144 YP_003697476.1 ABC transporter BAC0440 Protein 1e-51 49
Arch_1144 YP_003697476.1 ABC transporter BAC0350 Protein 2e-46 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_1144 YP_003697476.1 ABC transporter VFG0526 Protein 1e-46 45