Gene Information

Name : Arch_1143 (Arch_1143)
Accession : YP_003697475.1
Strain : Arcanobacterium haemolyticum DSM 20595
Genome accession: NC_014218
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1284367 - 1285236 bp
Length : 870 bp
Strand : -
Note : COGs: COG1108 ABC-type Mn2+/Zn2+ transporters permeases; InterPro IPR001626; KEGG: rer:RER_59750 manganese ABC transporter permease; PFAM: ABC transporter; SPTR: C0VYA2 Iron ABC superfamily ATP binding cassette transporter membrane protein; PFAM: ABC 3 tr

DNA sequence : 
ATGACGTTGGAGTGGTTTTATGCCACATTCGTTGAAATGTGGAGCCATACGTTTATGGTTCGTGGTTTCGCTGTGACTAT
TTTGGCGGCGTCGGTGTGCGCTCTGTTGTCATGTTGGCTGGTGTTGGTTGGCTGGTCGCTAATGGGGGACGCGCTTTCTC
ACGCCGTGGTGCCGGGAATCGTGTTGGCGTATATCGTGGGCTTACCGTTTTCGGTGGGTGCGTTTATTGCTGCGATCGTG
TGCGTTGCGTTGATTGCAGTGGTGCGTAACGGTTCGGGGCTGAAGGAAGATACGGTGATGGGCGTTGTGTTTACCACGAT
GCTCGCGTTGGGTTTGGTGTTGATTTCCGTGTTCCCAAGCCATATTCATTTGCAGCATGTTATTTTTGGCGATTTACTGG
GCATCACACAGGCTGACTTGTGGCAGGTTGTGGTGTTGGCTCCGTTGGCAGCGGTGATCGTGATTGTAAAACGTAAGGAT
CTTACCTTGTTTGCGTTCGATCCGATTCACGCGAGCGCGATTGGCTTGTCCACGAAGCGTCTTTCCGCCTTGCTCCTGAT
CTGTTTGGCGATGACCGTAGTGGTTGCGATGCAGGCAGTGGGCGCGATTTTGATCGTCGCGTTGCTGATTATTCCGGGCG
CTACCGCGTTTTTGTTGACGCAATCGTTTGGCCGCATGCTGTGGATTGCCCCGCTCACGTCCGCGTTGAGTGTGACGATC
GGGATTTACGTTTCGTACTGGTACAACATGGCGTCAGGCGCCACGGTTGTGTTGGCACACGGATGCGTATTTGCGATCGT
GTACGTTTTTTCGCCGCATGGTTTGGGGATGGGCCGGTTGCTTACGGGCGCCCGTTCCATTCGGAGATAA

Protein sequence : 
MTLEWFYATFVEMWSHTFMVRGFAVTILAASVCALLSCWLVLVGWSLMGDALSHAVVPGIVLAYIVGLPFSVGAFIAAIV
CVALIAVVRNGSGLKEDTVMGVVFTTMLALGLVLISVFPSHIHLQHVIFGDLLGITQADLWQVVVLAPLAAVIVIVKRKD
LTLFAFDPIHASAIGLSTKRLSALLLICLAMTVVVAMQAVGAILIVALLIIPGATAFLLTQSFGRMLWIAPLTSALSVTI
GIYVSYWYNMASGATVVLAHGCVFAIVYVFSPHGLGMGRLLTGARSIRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-36 46
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-36 46
sitD NP_461785.1 permease Virulence SPI-1 Protein 9e-36 45
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-36 45
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 6e-36 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_1143 YP_003697475.1 ABC transporter BAC0352 Protein 4e-36 45
Arch_1143 YP_003697475.1 ABC transporter BAC0442 Protein 2e-37 43
Arch_1143 YP_003697475.1 ABC transporter BAC0441 Protein 6e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arch_1143 YP_003697475.1 ABC transporter VFG0528 Protein 4e-36 45