Gene Information

Name : Snov_0859 (Snov_0859)
Accession : YP_003692802.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 895880 - 896638 bp
Length : 759 bp
Strand : -
Note : KEGG: msl:Msil_0769 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence :
ATGCTGCGGCTCGAAAATATCGGCAAGACCTATCCGTCCGGCACGCAGGCACTGGCCCATCTGACGCTGAGCGTGCGCCC
GGCCGAGATTCTCGCCGTGGTCGGTGGTTCCGGCTGCGGCAAGAGCACGCTGCTGCGCCTCATTGCCGGACTCGACCGGC
CGAGCGCCGGCCGGGTCGACCTCGACGGCGAGGCCATCACCGCCCCTCACCCGGCGGTGGGCGTCGTGTTCCAGGAGCCG
CGCCTGCTGGCCTGGCTGACCGTCGCGCAGAACATCGGCTTCGGCATCGCCCATTTGCCGCGCGCCGAGCGTGCCGCCCG
GGTCGAGCTGGCGCTCCAGCGCATCGGCCTTGCCGCGCATGGGGAGCGCTGGCCGCGCGAGCTCTCCGGCGGGCAGGCGC
AGCGTGTTGCGCTGGCCCGCGCGCTGATCGCCCAGCCGCGCGTCCTGCTGCTGGACGAGCCGTTTTCCGCGCTCGACGCC
TTCACCCGCGCCGACCTGCAGGAGCATCTCCTCGCCTTGTGGGAAGACACCCGCCCGACGCTGGTGCTCGTCACCCACGA
CATCGACGAGGCGCTGCTGCTCGCCGATCGGATCGTGGTGATGCAGCCAAATCCCGGACGGGTGGCGAGCCTTGTCAGCG
TCGAGCTGCCCCGCCCGCGAGAACCCGGCGCTCCGGACTTTGAAGCCCTCAAACGCCAGATCCTGAACGTCCTCGGTCCC
ATCCGCCGCCAAACGGCGATGCCAGCTGCCGCAGAATAG

Protein sequence :
MLRLENIGKTYPSGTQALAHLTLSVRPAEILAVVGGSGCGKSTLLRLIAGLDRPSAGRVDLDGEAITAPHPAVGVVFQEP
RLLAWLTVAQNIGFGIAHLPRAERAARVELALQRIGLAAHGERWPRELSGGQAQRVALARALIAQPRVLLLDEPFSALDA
FTRADLQEHLLALWEDTRPTLVLVTHDIDEALLLADRIVVMQPNPGRVASLVSVELPRPREPGAPDFEALKRQILNVLGP
IRRQTAMPAAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-41 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_0859 YP_003692802.1 ABC transporter NC_008702.1.4606598. Protein 1e-18 43