Gene Information

Name : Snov_4402 (Snov_4402)
Accession : YP_003696278.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Virulence
Product : family 2 glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 4648032 - 4649081 bp
Length : 1050 bp
Strand : +
Note : PFAM: glycosyl transferase family 2; KEGG: tmz:Tmz1t_3637 glycosyl transferase family 2

DNA sequence :
ATGACGAATTCTTCCCCAAGGTCACTTCACCTGATATCGGTCGTCGTCCCCGTCTATAACGAGGCGAGCTGCCTCGAGGC
GCTGCACGCCCGGCTGAGCGCCGTGCTGGATCACCATCCCGACGTGCAGCGCGAGTTCATCTTCGTCGACGACGGCAGCC
GCGACGGCAGCTTCGATATGCTGGTGGAATTGGGTCGCCGCGATCCCGCCGTCAAGGCGCTGCGCTTCGCCCGCAACTTC
GGCAAGGAATCGGCGATGGCCGCCGGCCTGCGCGCCGCGGTGGGCGACATCGTCGTGCTGATGGATTCCGACCTGCAGCA
TCCGCCGGAGGTCATTCCGCAGATGATCGAGCGCTGGCAGGACGGCGCGCAGATGGTCATCGCCGTGCGCCGCTCGCGCA
CCACCGATCCGCTCGGCCGGCGCCTTTTCACCCGCGGCTTCTATCATTTCTTCCGCGCGCTCTGTGAGGTCGACATCCCG
GAAGGGGCGGGCGACTTCCGCCTGTTCGACCGCCGTGTGGTCGACGCCATCAACGCCCTGCCGGAGCGCAACCGCTTCAT
GAAGGGCATCACCAGCTGGGTCGGCTTCCGTCAGGAGGAGATCGAGTTCGAGGTGGCCGAGCGCGCCGGCGGCGTCAGCT
CCTTCTCGACGCTGCGCCTGCTGCGCTACGCCATAGACGGGCTGTCCTCCTTCTCCATGGTGCCGCTGCGCGTCTGGTCG
CTGGCCGGCGTCATCCTCGCCGGCCTGTCCGGCCTCTACGGGATCTACATCCTCGGCGAGGTGCTGGTGCTTGGCGTGCG
CACGCCGGGCTTCCCGACGATCATGGTGAGCATGCTGTTCGTCTCCGGCGTGCAACTCATCAGCCTCGGCGTCATCGGCG
AATATGTCGGGCGCATCTTCACCGAGGTGAAGCACCGCCCGCTCTACCTCGTCGCCGACGAGGTCGGCTTCGCGCCTCCG
ACGGCTCTTCCTCCCTCCGCCCAATCTCTTTCCGCTCATGCCGGCGACCGGCATGTCCCCTCGCTCGTGCCCGACGGTTT
CGCCTCGTGA

Protein sequence :
MTNSSPRSLHLISVVVPVYNEASCLEALHARLSAVLDHHPDVQREFIFVDDGSRDGSFDMLVELGRRDPAVKALRFARNF
GKESAMAAGLRAAVGDIVVLMDSDLQHPPEVIPQMIERWQDGAQMVIAVRRSRTTDPLGRRLFTRGFYHFFRALCEVDIP
EGAGDFRLFDRRVVDAINALPERNRFMKGITSWVGFRQEEIEFEVAERAGGVSSFSTLRLLRYAIDGLSSFSMVPLRVWS
LAGVILAGLSGLYGIYILGEVLVLGVRTPGFPTIMVSMLFVSGVQLISLGVIGEYVGRIFTEVKHRPLYLVADEVGFAPP
TALPPSAQSLSAHAGDRHVPSLVPDGFAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 4e-57 46
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 1e-56 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_4402 YP_003696278.1 family 2 glycosyl transferase VFG0670 Protein 2e-58 46