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Name : Snov_0426 (Snov_0426) Accession : YP_003692378.1 Strain : Starkeya novella DSM 506 Genome accession: NC_014217 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 433785 - 435809 bp Length : 2025 bp Strand : + Note : KEGG: rsp:RSP_3268 transketolase; TIGRFAM: transketolase; PFAM: transketolase; transketolase central region DNA sequence : ATGCTCACCCGAAACGCCCCGACGTCCCAGCGTCCGCCCCAAGACCTGCCGGAAGTGCTGCACGACGACATGGCCAATGC GCTGCGCGCGCTCGCCATGGATGCGGTCGAACAGGCCAAGTCCGGCCATCCCGGCATGCCCATGGGCATGGCGGATGTCG CCACCGCCTTGTTCAGCCGCTTCGTGAAGATCGATCCGACCCGCCCGGACTGGTACGACCGCGACCGCGTCGTGCTCTCG GCCGGCCACGGCTCGATGCTGCTCTACGCCGTCAACCACCTGCTCGGCTATGCCGACATGGGCACCGACCAGCTCAGGCG CTTCCGCCAGCTCGGCGCGGTCACCGCCGGCCATCCCGAGCACGGCCACACGCTCGGCGTCGAGACCACCACCGGCCCGC TGGGCCAGGGGCTCGCCACCGCGGTCGGCATGGCGCTCGCCGAGCGCATGCTCAACGCCCGCTTCGGCGACGACCTCGTC GACCACTACACCTACGTCATCGCCGGCGACGGCTGCCTGATGGAAGGCATCAGCCACGAGGCCATCGACCTCGCCGGGCA CCTCAAGCTCGGCAAGCTGATCCTCCTGTGGGACGACAACGGCATCTCCATCGACGGGCGCACCACGCTCTCGACCTCGA CCGACCAGCTCGCCCGCTTCGAGGCGGCCGGCTGGGACGTGATGCGCGTCGACGGCCACGCCTATCACGCGGTGACCGAC GCGATCGCCGAGGCCCGCGGCACGGAGCGTCCGACGCTCATCGCCTGCCGCACCACCATCGGCTTCGGCGCGCCCACCAA GGCGGGCACGGAAGGCGCCCATGGCGCGCCGCTCGGCCCCGACGAGATCGCCGGCGCCCGCGCCCGGCTCGGCTGGAGCC ATCCGCCCTTCGAGGTGCCGGACGACGTCCGCGAGGCCTGGGCGCATACCGCCGCGCGCGGCCGTACCGCCCGCGAGGCC TGGGAGCGGCGCCTGTCCGGTTCCGGCCGCCGCGCCGCCTTCGAGGCGGCGATGGAAGGCGAACTGCCCGCCGATTTCGA CGAGAAGCTCGACGCCTACAAGCGCGAGCTGTCGCAGAGCGCGCCGAAGGTCGCGACCCGCAAGGCGTCGGAGATGGCGC TCGGGGTCATCAATGCCGAGACCGAGCTCACGGTCGGCGGCTCGGCCGACCTCACCCATTCCAACCTCACCTACACCAAG GGCCTGATGCCGGTGACGCCCGGCAACTTCGCCGGCCGCTACCTGCATTACGGGATCCGCGAGCACGCCATGGCGGCGGT GATGAACGGCCTCGCCTTGCATCGCGGCACCATCCCCTACGGCGGGACCTTCCTGGTCTTCTCCGACTATGCGCGGGGCG CCATGCGGCTCTCGGCGCTGATGGGCCAGCGCGTCGTCTATGTGCTGACGCACGACTCCATCGGCCTCGGCGAGGACGGG CCGACGCACCAGCCGGTCGAGCACCTCGCCATGCTGCGGGCGACGCCGAACCTGCATGTGTTCCGCCCCGCCGACGCGGT GGAGACGCTGGAAGCCTGGCAGCTCGCCTTGCATGCGGAGCGCACGCCCTCGGTGCTGGCGCTGTCGCGGCAGAACCTGC CGACCTTCCGCACCACGCACAGCGAGGAGAACCTCACCGGCTACGGCGCCTATGTCGCCCGCAAGCCCGAGCGCCGGCGC GACGTGACGCTGCTGGCGACCGGCTCGGAAGTCGAGCTCGCCTTTAAGGCGGCCGACATGCTTGCGCTGCGCGGCGTCGA CGCCGCCGTCGTCTCCATGCCCTGCTGGGAGCTGTTCGAGAAGCAGAGCGCGGATTATCGCCGCGCCGTGCTCGGCACCG CCCCGCGCGTCGCGGTGGAGGCGGCTGCCCGGTTCGGCTGGGACCGCTGGATCGGTGAGCGCGGCCGCTTCGTCGGCATG GAGGGCTTCGGCGCCTCGGCGCCGGCCGCCGACCTCTACAGGTACTTCAACATCACGCCGGAGGCGGTCGTTGCCGCTGC CTGCGACCTCATCACCTGCGCCTGA Protein sequence : MLTRNAPTSQRPPQDLPEVLHDDMANALRALAMDAVEQAKSGHPGMPMGMADVATALFSRFVKIDPTRPDWYDRDRVVLS AGHGSMLLYAVNHLLGYADMGTDQLRRFRQLGAVTAGHPEHGHTLGVETTTGPLGQGLATAVGMALAERMLNARFGDDLV DHYTYVIAGDGCLMEGISHEAIDLAGHLKLGKLILLWDDNGISIDGRTTLSTSTDQLARFEAAGWDVMRVDGHAYHAVTD AIAEARGTERPTLIACRTTIGFGAPTKAGTEGAHGAPLGPDEIAGARARLGWSHPPFEVPDDVREAWAHTAARGRTAREA WERRLSGSGRRAAFEAAMEGELPADFDEKLDAYKRELSQSAPKVATRKASEMALGVINAETELTVGGSADLTHSNLTYTK GLMPVTPGNFAGRYLHYGIREHAMAAVMNGLALHRGTIPYGGTFLVFSDYARGAMRLSALMGQRVVYVLTHDSIGLGEDG PTHQPVEHLAMLRATPNLHVFRPADAVETLEAWQLALHAERTPSVLALSRQNLPTFRTTHSEENLTGYGAYVARKPERRR DVTLLATGSEVELAFKAADMLALRGVDAAVVSMPCWELFEKQSADYRRAVLGTAPRVAVEAAARFGWDRWIGERGRFVGM EGFGASAPAADLYRYFNITPEAVVAAACDLITCA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-144 | 51 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 6e-140 | 48 |
