Gene Information

Name : Snov_4204 (Snov_4204)
Accession : YP_003696092.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 4441351 - 4442355 bp
Length : 1005 bp
Strand : -
Note : KEGG: smd:Smed_5203 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain

DNA sequence :
ATGTCGTTCAACCTCAGAAACCGCTCGCTCCTGACCGTGCAGGACTACACGCAGCGCGAGTTCCAGTTCCTGCTCGACCT
CGCGCGCGACCTGAAGCGGGCGAAGTATTCCGGCACCGAGCAGCCGCATCTGAAGGGCCGCGAAGTGGTGCTGATCTTCG
AGAAGACCAGCACTCGCACCCGCTGCGCCTTCGAGGTGGCCTGCCACGACCAGGGCGCCAACGTGACCTATCTCGATCCG
GCCGGTTCGCAGATCGGGCACAAGGAATCCTTCAAGGACACCGCCCGCGTGCTCGGGCGCATGTTCGACGCCATCGAGTA
TCGCGGCGCCTCGCAGACCGGCGTCGAGCAGCTCGCCAAATATGCCGGCGTGCCGGTCTATAACGGCCTCACCGACGAGT
ACCATCCGACCCAGATGCTCGCCGACGTGATGACCATGCGCGAGCACTCGGACAAGCCGGTGCACGAGATCAAATACGCC
TATGTCGGCGACACCCGCTCCAACATGGGCCATTCGCTGATGATCGCCGGCTGCCTGATGGGCATGGATGTGCGCATCGC
CGGCCCGAAGAAGCTCTGGCCCTCCGACGAGTTCGTCACCATCGCCCGCGACCTCGAGAAGCGCTACGGCGCCAAGCTCA
CCATCACCGACGACCCGAAGGCGGCGGTGAAGGGAGCCGACTTCATCCATACCGATGTCTGGGTCTCGATGGGCGAGCCC
AAGGAGGTGTGGAAGGAGCGCATCAAGCTGCTCAAGCCGTTCCAGGTGAACGCGGCGCTGATGAAGGCGAGCGGCAATCC
GCGCGTGAAATTCATGCACTGCCTGCCGGCCTTCCACGACACCGAGACCACGGTCGGCAAGGACATCGCCGACAAGTTCG
GCATCCATGACGGGCTCGAGGTCACCGACGAGGTGTTCGAGAGCGAGGCCAATGTCGCCTTCGAGCAGGCGGAGAACCGG
CTGCACACCATCAAGGCGCTGCTCGTCGCCACGCTCGGGGAGTAG

Protein sequence :
MSFNLRNRSLLTVQDYTQREFQFLLDLARDLKRAKYSGTEQPHLKGREVVLIFEKTSTRTRCAFEVACHDQGANVTYLDP
AGSQIGHKESFKDTARVLGRMFDAIEYRGASQTGVEQLAKYAGVPVYNGLTDEYHPTQMLADVMTMREHSDKPVHEIKYA
YVGDTRSNMGHSLMIAGCLMGMDVRIAGPKKLWPSDEFVTIARDLEKRYGAKLTITDDPKAAVKGADFIHTDVWVSMGEP
KEVWKERIKLLKPFQVNAALMKASGNPRVKFMHCLPAFHDTETTVGKDIADKFGIHDGLEVTDEVFESEANVAFEQAENR
LHTIKALLVATLGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 7e-96 61
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-94 60
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-94 60
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-94 60
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-95 60
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-95 60
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 9e-95 60