Gene Information

Name : Snov_4046 (Snov_4046)
Accession : YP_003695935.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4278316 - 4279080 bp
Length : 765 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_B1297 short chain dehydrogenase

DNA sequence :
ATGCCCCGCCTCAAGGAAAAAGTCGCCATCGTCACCGGCGCCAGCTCCGGCATCGGCCGCGCCACGGCGCTGCTCTTCGC
CGCCGAGGGCGCGAAGGTCGTGGTGGGCGCGCGCCGCAAGGATGAGCTCGACGCCCTGGTCGCCGAGATCGCCTCCGCCG
GCGGCGAGGCGGTGGCTCTCGCCGGCGACGTGCGCTCGAAGGACTATGCGCAGGCGCTGGTGGCGCTGGCGGTCGAGCGC
TACGGTCGGCTCGACGTCGCCTTCAACAATGCCGGCATTCTCGGCGAGGGCGGCGACAGCACCGGCGTCTCCGCCGAGGG
CTGGAACGAGGCGCTGGCGATCAACTTGACCGGCGCCTTCTTCGGCGCCCAGCAGCAGATCGCGCAGATGCTTAAGGATG
GCGGCGGCTCGGTGATCTTCACCTCGACCTTCGTCGGCTACACGCTCGCCTTCCCCGGCACGGCCGCCTATGCCGCCTCC
AAGTCCGGGCTGATCGGGCTGACGCAGGCGCTCGCTGCCGAATACGGGCCGCAGGGCGTGCGGGTGAACGCGGTGCTGCC
GGGCGCCATCGACACGCCGATGTTCCGCGAGCGCAGCCCCGACGCGGCGAGCCAGGCCACTCTCGCCGGCATGCACGCGC
TGAAGCGCGTCGGCGCGCCGGAGGAGATCGCGCGCTCCGTGCTCTATCTCGCCTCGGACGACGCGTCCTTCGTGTCGGGC
ACCGCGCATCTGGTCGATGGCGGCCTGTCGATCACCCGCAGCTGA

Protein sequence :
MPRLKEKVAIVTGASSGIGRATALLFAAEGAKVVVGARRKDELDALVAEIASAGGEAVALAGDVRSKDYAQALVALAVER
YGRLDVAFNNAGILGEGGDSTGVSAEGWNEALAINLTGAFFGAQQQIAQMLKDGGGSVIFTSTFVGYTLAFPGTAAYAAS
KSGLIGLTQALAAEYGPQGVRVNAVLPGAIDTPMFRERSPDAASQATLAGMHALKRVGAPEEIARSVLYLASDDASFVSG
TAHLVDGGLSITRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 5e-16 41