|
Name : Snov_3838 (Snov_3838) Accession : YP_003695727.1 Strain : Starkeya novella DSM 506 Genome accession: NC_014217 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 4057955 - 4058668 bp Length : 714 bp Strand : + Note : TIGRFAM: ribonuclease PH; KEGG: xau:Xaut_2535 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 DNA sequence : ATGCGCCCTTCCCGCCGCCAGCCCGACGAGATGCGGGCCGTCAGCTTCGAGCGCGGCGTGCTGCGCCATGCCGAGGGCTC GTGCCTGGTCAAGTTCGGCGAGACGCATGTGCTCGTCGCCGCCACGCTGGAAGAGCGCCTGCCGCCCTGGCTGAAGGGGC AGGGGCGCGGCTGGGTCACGGCGGAATACGGCATGCTGCCGCGCGCCACCCATGAGCGCACCCGCCGCGAGGTCACCGCC GGCAAGCCCTCCGGCCGCACCCACGAGATCCAGCGCCTGATCGGCCGCTCGCTGCGCACCGTGGTGGACCTGGAGAAGCT CGGCGAGCGCCAGATCACCGTCGACTGCGACGTCATCCAGGCCGATGGCGGCACCCGCACCGCCTCCATCACCGGCGCCT GGATCGCCCTGCACGACTGCCTGAGCTGGATGAAAACGCGGGGAATGCTGGCAACGATTCCCCTTCGCGACCACATCGCC GCCGTCTCCTGCGGCATCGTCGACGGCGAGCCGCGGCTCGACCTCGACTATGTGGAGGATTCCTCGGCCCATACCGACGT CAACTTCGTCATGACCGGCACCGGCGGCTTCGTCGAGATCCAGGGCACGGCGGAGAAGACGCCGTTCACCGAGGACGAGT TCGGCGCCATGCTCGGCCTTGCCCGCAAGGGCGTCGCCAAGCTGGTCGACCTGCAGAAGCTGGCGGTGTCATGA Protein sequence : MRPSRRQPDEMRAVSFERGVLRHAEGSCLVKFGETHVLVAATLEERLPPWLKGQGRGWVTAEYGMLPRATHERTRREVTA GKPSGRTHEIQRLIGRSLRTVVDLEKLGERQITVDCDVIQADGGTRTASITGAWIALHDCLSWMKTRGMLATIPLRDHIA AVSCGIVDGEPRLDLDYVEDSSAHTDVNFVMTGTGGFVEIQGTAEKTPFTEDEFGAMLGLARKGVAKLVDLQKLAVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-52 | 52 |
