Gene Information

Name : Snov_3637 (Snov_3637)
Accession : YP_003695527.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3833927 - 3834712 bp
Length : 786 bp
Strand : -
Note : KEGG: oan:Oant_3476 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence : 
ATGAGCGCCGCCGCTCCGCTGTTCGAGCTTGCCGAGGTGCATTTCGGCGTCGAGGGACGCACGCTGCTGCACCCTCTCAG
CCTTGCCGTGCCGGCGGGCCGCGTGGTCGGGCTGATCGGGCACAACGGCTCGGGCAAGTCGACGCTGCTGAAGCTGCTCG
GCCGGCAGCTTGCGGCCAGCGGTGGGGAGATCCGCTTCGAGGGCCGGCCGCTCGCCGGCTGGGGCCCGCGCGACTTTGCC
CGGCGCGTCGCCTATCTGCCGCAGTCCTCGCCGGCCACCGGCGGCATGACCGCGCGCGAACTGATCGCGCTCGGCCGCTA
TCCCTGGCATGGCGCGCTGGGTCGGTTCGGCGCCGTTGACCGGCAGAAGGTCGAGGAGGCGATCGCGCTGACCGACACCG
CGGTCTTCGCCGACCGCCTCGTTGACACGCTGTCCGGGGGCGAGCGCCAGCGCGTCTGGATCGCCATGCTGGTGGCGCAG
GATGCCGATTGCCTGCTGCTGGACGAGCCGATCTCGGCGCTGGACATCGCTCACCAGATCGAGGTGCTCACGCTGATCCG
CAGTCTCTGCCGCGAGCGCGGGACCGGCGTCGTCGTGGTGCTGCACGACGTGAACATGGCGGCGCGCTTCTGTGACGACA
TCATCGCGCTGCATGGGGGGAGACTGATGGCGCGCGGCACGCCGGAGGAGATGGTCACGCCGCAGACGCTGGAGCGCATC
TACGGCATCGCCATGGACGTGATCCGCCAGGACGGCAGGGGGCATGTCGCCGTGCCGCGCCTTTGA

Protein sequence : 
MSAAAPLFELAEVHFGVEGRTLLHPLSLAVPAGRVVGLIGHNGSGKSTLLKLLGRQLAASGGEIRFEGRPLAGWGPRDFA
RRVAYLPQSSPATGGMTARELIALGRYPWHGALGRFGAVDRQKVEEAIALTDTAVFADRLVDTLSGGERQRVWIAMLVAQ
DADCLLLDEPISALDIAHQIEVLTLIRSLCRERGTGVVVVLHDVNMAARFCDDIIALHGGRLMARGTPEEMVTPQTLERI
YGIAMDVIRQDGRGHVAVPRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-40 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-41 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-41 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-41 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_3637 YP_003695527.1 ABC transporter VFG0925 Protein 7e-37 43