Gene Information

Name : Snov_3328 (Snov_3328)
Accession : YP_003695221.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3501521 - 3502303 bp
Length : 783 bp
Strand : +
Note : KEGG: spe:Spro_3221 ABC transporter-related protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
ATGGGCACGCCGAAGCTTTCCATCGAAGCGCTGTCGGTCGGCTACGGCCGGCGGAAGATCATCGAGAATCTCTCGCTTCC
CGCCATTGCCGGCGGCGCGGTGACGGCGCTGATCGGGCCCAACGCCGCCGGCAAGACCACGCTGCTGCGCGCGCTCGCCG
GCCTCGTCCCGGCCAAGGGATCGATCCACCTCGACGACACCGAGCTGACCTCGCTCTCGGTCGCGGGCCATGCGCGGCAC
GTCACCTACATGCCGCAGGCGCTGCCGCAGCGCGTGGCGCTCACCGTGTTCGAGGCGACGCTGTCGGCGCTGATGTCGGC
GCGCGACGACGCCATCTCCACCGCCGAGGCGCATGAGCGCGCGCTGCACGCGCTGGACCGGCTCGGCATCGCCGACCTCG
CCTTGCGCGGGCTGGATGAGCTGTCCGGCGGCCAGCGCCAGCTTGCCAGCCTCGCCCAGTCCATCGTGCGCGAGCCGACC
GTGCTGCTGCTGGACGAGCCGACCAGCGCGCTCGACATCCACCATCAGCTGCGCGTCATGCAGCTCGTCGCCGAGGTGGC
GCGCGAGCGCGGCATCATCGTCGTCATCGTGCTGCACGACATCGCCCAGGCCGCCCGCTACGCGCAGCGCATCGTGCTCC
TGGAGCAGGGCGCGATCGCCGCAGATGGCCCGCCCGACGAGGCGATCACGCCGGCGACGCTGGCTCGGGTCTACAAGGTC
GAGGCGCGCGTCGAGCGCTGCTCGCATGGAACCTTGCAGGTGATCGTAGATAGGGCGGTGTAG

Protein sequence : 
MGTPKLSIEALSVGYGRRKIIENLSLPAIAGGAVTALIGPNAAGKTTLLRALAGLVPAKGSIHLDDTELTSLSVAGHARH
VTYMPQALPQRVALTVFEATLSALMSARDDAISTAEAHERALHALDRLGIADLALRGLDELSGGQRQLASLAQSIVREPT
VLLLDEPTSALDIHHQLRVMQLVAEVARERGIIVVIVLHDIAQAARYAQRIVLLEQGAIAADGPPDEAITPATLARVYKV
EARVERCSHGTLQVIVDRAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67370.1 ferric-enterobactin-transport protein Not tested PAI II CFT073 Protein 3e-53 48
irp6C NP_938506.1 ATP-binding protein Irp6C Not tested Not named Protein 7e-37 41
irp6C YP_005124377.1 ATP-binding protein Irp6C Virulence Not named Protein 3e-37 41
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_3328 YP_003695221.1 ABC transporter BAC0164 Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_3328 YP_003695221.1 ABC transporter VFG1042 Protein 9e-34 41