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Name : Snov_3217 (Snov_3217) Accession : YP_003695111.1 Strain : Starkeya novella DSM 506 Genome accession: NC_014217 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3379715 - 3381709 bp Length : 1995 bp Strand : - Note : PFAM: polysaccharide biosynthesis protein CapD; KEGG: swp:swp_1595 polysaccharide biosynthesis protein CapD DNA sequence : ATGGAGCTGCGCTCCGATTTTCTGGGCTATGCGTTTGGCCTTAGCCGGCGAAAGAAGCGGCTCGTCCTGTGCTTGCTGGA CTCGGCGCTTCTCGGCGCAAGCTTCCTGCTGGCGATGGCGTTACGCCTCGACGGCTTCTCCTTGGCGCTCGTCGGCGAAA GCTGGGTCGCTTTTGCGATCATATTGCCCCCGACCATCGCGTTCTTCGCCTGGCTGGGGCTGTACCGCGCGGTGGTCCGG CATGTCGCGGCGAGCACCCTGCGCGTGCTCGCCCTCGGCCTCGCCATCTCCGCGGCCTCGCTCTTCGTGGTCGGGCAGCG GCTGGACCTGTTCCTGCCGCGCTCCGTCCCGATCATCTACTGGCTGCTCGCCATGTTTCTTCTGGGCGGCGGACGCTTCG GCCTGCGGGGGCTATATCGGCAGAGCCGCTCGCGTCTCTCCTCCCCGGTGCTGATCTATGGTGCTGGCAGCGCGGGGCGG CAGTTGCTCGCCTCGCTGCAGGCCAGCGGCGACTACGCGCCCGTCGCCTTCATCGACGACGCCCGGGAGCTGCACGGGCG CGAGATCGGCGGCTGCCGTATCTATTCACCGAACCGCATCGGCGAGCTGATCGCCCAGCACGATATCGGCAGCATGCTGC TCGCTATTCCCAGCGCTACCCGGCAGCAGCGCAAGGCGATCGTCGAACGCCTTGACCCCTTCGGCGTGCGCGTGCTTACG ATTCCCGGCATGGCGGACATCGTCGTCGGCCGCGCCACTATCAGTGAGACGCGCGAGGTCGCCATCGAGGATCTTCTGGG CCGCGATCCCATTCCGCCCCGGCAAGACCTGCTCGATGCCAACATCCGCGGCAAGACGGCGATGGTCACCGGCGCCGGCG GCTCCATCGGCAGCGAGCTGTGCCGGCAGATCGCCCGGCAGCGCGTGGCGCGGCTGGTGCTGCTCGAGAACTCCGAATTC GCGCTCTACAGCGTGGAGCGGGAACTTGCGATGCTCGCCGCGCGCGAGAGGCTGGAGCTTCCCCTCGTGCCGTTGCTCGG CTCGGTGCAGGATGGGGAGCGCGTGAGCGCAGCGCTGCGCTCGCACGGCGTGCAGACAGTTTTTCATGCCGCGGCGTACA AGCACGTACCGCTGGTCGAGCAGAACGTCGTGGACGGCGTGCGCAACAACGTGTTCGGCACGGAGACGGTCGCGCGGTCG GCCATCGAGGCGGGGGTCGGCGCCTTCGTTCTGGTGTCGACCGACAAGGCGGTGCGCCCGACCAGCGTCATGGGCGCCTC CAAGCGCGTCGCCGAGCTGGTTTGCCAGGCGCTGGCGCGCCAGCAATCGGCGACGACCTTCTCCATCGTCCGCTTCGGCA ACGTGCTCGGCTCGTCCGGCTCAGTGATCCCACTATTCCGGCAGCAGATCGAGGCGGGCGGGCCGATCACCGTCACGCAT CATGAGATGACGCGCTACTTCATGACTATCCGGGAAGCGGCGCAACTGGTCATCCAGGCCGGCGCGCTGGCCCGAGGTGG CGACGTGTTCGTGCTCGACATGGGCGAGCCGGTGCGCATCATCGATCTCGCTATGCGCATGGCACGCCTGTCCGGCCTCA ATCCCGTGATTCGCCAGCCCGGGCACGGCGATGGCGCGGGGGCGGGTGGCGACATCGAGATCGTGATGTCGCAGCTGCGT CCAGGCGAGAAGCTCTATGAGGAACTGCTCATCGGCGGCGACGCCGTCCCGACCGTGCATCCGCGCATCCTCACCGCCAG CGAGAGCAGCCTCGACTGGCCGGAACTCGCCTCGATCCTTCAGAACCTGAAGGAGGCATGCGACGTTCACGCGCCCGAAC GTGTCCGCGCGATCCTTCGGGGCGCTCAGGTCGGCTTTTCTCCTGCCGCCGAGGGCGTGGAGCCCGCGGGTGGCGGGGCC GAGCTGCCCCTCATGCGAGACGAGGGTCGCGAGCATGCGGCTCCGGCGCATCTCGTGCGCGATGGAAGCTTTTAG Protein sequence : MELRSDFLGYAFGLSRRKKRLVLCLLDSALLGASFLLAMALRLDGFSLALVGESWVAFAIILPPTIAFFAWLGLYRAVVR HVAASTLRVLALGLAISAASLFVVGQRLDLFLPRSVPIIYWLLAMFLLGGGRFGLRGLYRQSRSRLSSPVLIYGAGSAGR QLLASLQASGDYAPVAFIDDARELHGREIGGCRIYSPNRIGELIAQHDIGSMLLAIPSATRQQRKAIVERLDPFGVRVLT IPGMADIVVGRATISETREVAIEDLLGRDPIPPRQDLLDANIRGKTAMVTGAGGSIGSELCRQIARQRVARLVLLENSEF ALYSVERELAMLAARERLELPLVPLLGSVQDGERVSAALRSHGVQTVFHAAAYKHVPLVEQNVVDGVRNNVFGTETVARS AIEAGVGAFVLVSTDKAVRPTSVMGASKRVAELVCQALARQQSATTFSIVRFGNVLGSSGSVIPLFRQQIEAGGPITVTH HEMTRYFMTIREAAQLVIQAGALARGGDVFVLDMGEPVRIIDLAMRMARLSGLNPVIRQPGHGDGAGAGGDIEIVMSQLR PGEKLYEELLIGGDAVPTVHPRILTASESSLDWPELASILQNLKEACDVHAPERVRAILRGAQVGFSPAAEGVEPAGGGA ELPLMRDEGREHAAPAHLVRDGSF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 5e-68 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Snov_3217 | YP_003695111.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 1e-101 | 53 |
