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Name : Snov_3207 (Snov_3207) Accession : YP_003695101.1 Strain : Starkeya novella DSM 506 Genome accession: NC_014217 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 3367412 - 3368695 bp Length : 1284 bp Strand : + Note : KEGG: tmz:Tmz1t_1116 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase DNA sequence : ATGCTGGTCCAGACCGTCGAGACTGCCCGCCTTGCCGTGATCGGCCTCGGCTATGTCGGCCTGCCGGTGGCGGTCGAGTT CGGCAAGCACCATCCCGTCGTCGGCTTCGACATCAATCCGGCGCGGATCGAGGCGCTGCGCCAGGGCATCGATGCGACGC TGGAGGTGAGCGCGCAGGAGCTCGCCGAGGCGCATCTCCTGAGCTTCTCCGCCGAGCTGGAAGATCTGCGCGCCTGCACC ACCTTCATCGTCACCGTGCCCACCCCCATCGACGGCCACAAGCGGCCTGACCTGACGCCACTGCTCCGCGCCTCCGAGAC GGTCGGCAAGGTGCTGAAGCGCGGCGACGTGGTAGTCTACGAATCTACCGTCTATCCCGGCGCCACCGAGGATGACTGCG TTCCGGTGCTGGAGCGCGTCTCCGGCCTCGTCTTCAACCGCGACTTCTTCGTCGGCTACAGTCCGGAGCGCATCAATCCC GGCGACCGCAGGCACCGGCTCGCTACTATCCGCAAAGTGACCGCCGGCTCGACGCCGGAGGCGGCGGAGTTCGTCGACGC GCTCTATGCCGGCATCGTCACCGCCGGCACCTTCAAGGCCGAGAGCATCCGCGTCGCCGAGACGGCCAAGGTGATCGAGA ACACCCAGCGCGACCTCAACATCGCGCTGATCAACGAGCTCGCCATCATCTTCAACCGCATGGGCATCGACACCGAGGCG GTGCTGAAGGCGGCCGAGACGAAGTGGAACTTCCTGCCCTTCCGGCCGGGCCTGGTCGGCGGCCACTGCATCGGCGTCGA CCCCTACTACCTGACGCACAAGGCGCAGACCGTCGGCTACCACCCGGAGATCATCCTCGCCGGCCGACGGCTGAACGACG GCATGGGCGCCTATGTCGCCGCCCAGCTGGTGAAAGCGATGCTGAAGCGCCGCATCCAGGTGGAGGGCGCGCGCGTGCTG GTGATGGGCCTCACCTTCAAGGAGAACTGCCCGGACCTGCGCAACACCCGCGTGGTCGACGTGATGCGCGAGTTGAAGGA TTTCGGCGTCGAGGTCGACGTCCACGATCCGTGGGTCAGCGCCGACGAGGCTCGGCACGAATACGGCATCGCCGTCATCG CCGAGCCGGAGGCCGCGAGCTATGACGGCATCGTGCTGGCCGTCGCGCATGAGGCGTTCCGAAGCATGGGCGCCGAGGCC ATCCGGGCCTATGGCAAGCCCGAGCATGTGCTGTACGACCTCAAATACATCCTGCCGCGCGACGAGGCCGGCCTGCGGCT CTAG Protein sequence : MLVQTVETARLAVIGLGYVGLPVAVEFGKHHPVVGFDINPARIEALRQGIDATLEVSAQELAEAHLLSFSAELEDLRACT TFIVTVPTPIDGHKRPDLTPLLRASETVGKVLKRGDVVVYESTVYPGATEDDCVPVLERVSGLVFNRDFFVGYSPERINP GDRRHRLATIRKVTAGSTPEAAEFVDALYAGIVTAGTFKAESIRVAETAKVIENTQRDLNIALINELAIIFNRMGIDTEA VLKAAETKWNFLPFRPGLVGGHCIGVDPYYLTHKAQTVGYHPEIILAGRRLNDGMGAYVAAQLVKAMLKRRIQVEGARVL VMGLTFKENCPDLRNTRVVDVMRELKDFGVEVDVHDPWVSADEARHEYGIAVIAEPEAASYDGIVLAVAHEAFRSMGAEA IRAYGKPEHVLYDLKYILPRDEAGLRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 6e-143 | 65 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 6e-143 | 65 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-109 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Snov_3207 | YP_003695101.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 3e-143 | 65 |
