|
Name : Snov_0259 (Snov_0259) Accession : YP_003692212.1 Strain : Starkeya novella DSM 506 Genome accession: NC_014217 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 250398 - 252029 bp Length : 1632 bp Strand : + Note : KEGG: bra:BRADO1006 oligopeptide ABC transporter ATP-binding protein; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA DNA sequence : ATGACCTCCACCTCCCCCCTCCTCTCCGTCCAGGACCTCTCCGTCGCCTTCGCGCAGGGAGCGCGGACGACGCTCGCGGT GGACCATGTCTCCTTCGACCTGAAGCGCGGGGAGACGGTGGCGCTGGTGGGCGAGTCCGGCTCCGGCAAGTCAGTGACGG CGCTCTCCATCCTCAAGCTGCTGCAATATCCCGCCGCCAGCCACCCCTCAGGCAAGGTGCTGTTCAAGGGCGCGGACCTG CTCGCCATGTCCGAGCGCGAGATACGCGGCGTGCGCGGCAACGACATCACCATGGTGTTCCAGGAGCCGATGACCTCGCT CAATCCGCTGCACACGGTGGAGCAGCAGATCGCCGAGATCCTGTTCCTGCACCGCGGCATGCGGGGCGCGGGCGCGCGGG CGCGGGTGATCGAGCTGCTCACCGAGGTCGGCATCCCCGAGCCGGAGACGCGGCTCGGCTCCTACCCGCACCAGCTCTCC GGCGGCCAGCGCCAGCGCGTGATGATCGCCATGGCGCTCGCCAACGAGCCGCAATTGCTCATCGCCGACGAGCCGACCAC GGCGCTCGACGTCACCGTGCAGGCGCAGATCCTCAAGCTCTTGAAGGACCTCCAGCGCCGGCTCGGCATGGCGATGCTGT TCATCACCCACGACCTCGGCATCGTGCGCAAGATCGCCGACCATGTCTGCGTGATGAACAAGGGCCGCATCGTCGAGGCG GGGCCGGTGGCGGACATCTTCGCCAAGCCGCAGCATCCCTATACGCGCGCGCTCATCGCCGCCCAGCCGCGCGGCAATCC CGAGCCGCCGCACCCGGAAGCGCCGGTGGTGCTGGAGGCGAAGGACCTGAAGGTCTGGTTCCCGATCAAGGCCGGCCTGA TGCGCAAGACCGTCGGCCATATCAAGGCGGTGGACGGCATCTCGGTGGAGATAAGGCGCGGCGAGACGCTGGGCGTCGTC GGCGAATCCGGCTCCGGCAAGACCACGCTCGGCCTCGCTTTGCTGCGCCTCATCTCCAGCGACGGGCCGATCGTGTTCAT GGGCGAGAGCATCGACACGCTCGGCTTCAAGCAGATGCGCTCGCACCGGCACGCGATGCAGGTGGTGTTCCAGGACCCGT TCGGCTCGCTCTCGCCGCGCATGTCGATCGCCGACATCGTCGGCGAGGGGCTGCGCGTGCATCAGCCCAAGCTCTCGGCC GAGGAGCGCGAGCAGCGGGTGATCGATGCGCTCAAGGATGTCGGCTTGGAGCCGGAGAGCCGGCACCGCTACCCGCACGA ATTCTCCGGCGGCCAGCGCCAGCGTGTCGCCATCGCCCGCGCCATCGTGCTGGAGCCCTCCTTCGTGGTGCTGGACGAGC CGACCAGCGCGCTGGACATGATCGTGCAGGCGCAGATCGTCGACCTGCTGCGCGACCTCCAGCACAAGCGCGGGCTGACC TATCTCTTCATCAGCCACGATCTGCGCGTCGTCGCCGCGCTTGCCTCGCGGGTCATGGTGATGAAGGGCGGCGTGGTGGT GGAGGAAGGCCCCGCCGCCGACCTCTTCGCCCACCCGAAGACCGACTACACGCGGGCGCTGTTCGCCGCCGCCTTCAACA TCGAGACCGCCGGTACCGCGGCGGACGCCTAG Protein sequence : MTSTSPLLSVQDLSVAFAQGARTTLAVDHVSFDLKRGETVALVGESGSGKSVTALSILKLLQYPAASHPSGKVLFKGADL LAMSEREIRGVRGNDITMVFQEPMTSLNPLHTVEQQIAEILFLHRGMRGAGARARVIELLTEVGIPEPETRLGSYPHQLS GGQRQRVMIAMALANEPQLLIADEPTTALDVTVQAQILKLLKDLQRRLGMAMLFITHDLGIVRKIADHVCVMNKGRIVEA GPVADIFAKPQHPYTRALIAAQPRGNPEPPHPEAPVVLEAKDLKVWFPIKAGLMRKTVGHIKAVDGISVEIRRGETLGVV GESGSGKTTLGLALLRLISSDGPIVFMGESIDTLGFKQMRSHRHAMQVVFQDPFGSLSPRMSIADIVGEGLRVHQPKLSA EEREQRVIDALKDVGLEPESRHRYPHEFSGGQRQRVAIARAIVLEPSFVVLDEPTSALDMIVQAQIVDLLRDLQHKRGLT YLFISHDLRVVAALASRVMVMKGGVVVEEGPAADLFAHPKTDYTRALFAAAFNIETAGTAADA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-95 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
