Gene Information

Name : Snov_0251 (Snov_0251)
Accession : YP_003692205.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 241370 - 242125 bp
Length : 756 bp
Strand : -
Note : TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: azc:AZC_0137 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence :
ATGTCCTCCCAGGACACACTTATTCTTATTCCAGCCCGCATGGCTTCCACGCGGCTGCCGGGAAAGCCGCTCGCCGATCT
CGGCGGCCGGCCGATGATCGTCGAGGTGGCGCGGCGTTCCGCCGCGGCCAATATCGGCCGCGTCGTCGTCGCCACCGACG
ATGAAGGCGTGCGCAAGGCGGTGGAAAACGCCGGATTCGCCGTCGTCATGACCCGCGCCGACCACACCACGGGCTCGGAC
CGAATCTTCGAGGCACTCGGCCATGTCGACCCGGAGCGCCGGGTGAGCCGCATCGTCAACGTGCAGGGCGACCTGCCGAC
CATCGATCCGGCGCTGATCCGCTCCGCCGTCGACCTGCTCGACGATCCGGCCGTCGACATCGGCACGCTGGCGGCGCAGA
TCACGGTCGAGGCCGAGCGCACCAACCCGAACGTGGTGAAGGCGGTCGGCAGCCCGCTCTCGCCCTCGCGCCTGCGCGCG
CTCTATTTCACCCGCGCCACTGCCCCCTATGGCGAGGGGCCGCTGTTCCACCATATCGGCCTCTACGCCTATCGCCGCGC
CGCGCTGGAGCGCTTCGTCGCCCTGCCGCCCTCGCCGCTGGAGAGCCGCGAGAAGCTGGAACAGCTGCGCGCGCTGGAAG
CCGGCATGCGCATCGACGTCGCCATCGTCGACACCGTGCCGCTCGGCGTCGACACGCCGGAAGACCTCGAACGCGCGCGG
GAGCTTCTGGCGCGCGAAGCCAAGACCGCCAAGTGA

Protein sequence :
MSSQDTLILIPARMASTRLPGKPLADLGGRPMIVEVARRSAAANIGRVVVATDDEGVRKAVENAGFAVVMTRADHTTGSD
RIFEALGHVDPERRVSRIVNVQGDLPTIDPALIRSAVDLLDDPAVDIGTLAAQITVEAERTNPNVVKAVGSPLSPSRLRA
LYFTRATAPYGEGPLFHHIGLYAYRRAALERFVALPPSPLESREKLEQLRALEAGMRIDVAIVDTVPLGVDTPEDLERAR
ELLAREAKTAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 5e-31 43
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-30 43
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 4e-31 43