Gene Information

Name : Snov_2415 (Snov_2415)
Accession : YP_003694329.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 2531960 - 2533477 bp
Length : 1518 bp
Strand : +
Note : KEGG: mlo:mll6639 aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase

DNA sequence :
ATGAACAAGCCAGAACTCTCCATTACCAAGCAGTCGCCTTTCAAAGCCCGCTACGGCAACTTCATCGGCGGCCAGTTCGT
CGAGCCGGTGAACGGGCGCTATTTCGACAACACTTCGCCCATCACGGGCGGCAAGATCTGCGAGGTCGCCCGCTCGGACA
AGGACGACATCGAGAAGGCGCTCGACGCGGCCCACGCCGCCAAGGATGCCTGGGGCAAGACCTCGGCCGCCGAGCGCGCG
CTGATCCTCAACAAGGTCGCCGACCGCATGGAGGAGAATCTCGACCTGCTCGCGCTGGCCGAGACCTGGGACAACGGCAA
GCCGATCCGCGAGACCACGGCCGCCGACATCCCGCTCGCCATCGACCATTTCCGCTATTTCGCCGCCTGCGTCCGCGCGC
AGGAGGGCAACCTCTCCGAGATCGACCACGACACCATCGCCTATCACTTCCACGAGCCGCTCGGCGTGGTCGGGCAGATC
ATCCCGTGGAACTTCCCGATCCTGATGGCGGTGTGGAAGCTCGCTCCCGCGCTCGCCGCCGGCAACTGCGTGGTGCTCAA
GCCCGCCGAGCAGACGCCCTCCAGCGTGCTGGTGCTTGCCGAGCTGGTGGCCGACCTGCTGCCGCCCGGCGTGCTGAACA
TCGTCAACGGCTATGGCCTGGAAGCGGGCAAGCCGCTCGCCTCCAACCCGCGCATCGCCAAGATCGCCTTCACCGGCGAG
ACGACGACGGGCCGGCTGATCATGCAGTACGCCAGCCAGAACCTGATCCCGGTGACGCTGGAGCTCGGCGGCAAGTCGCC
GAACATCTTCTTCGGCGATGTGGTGGCCGAGGACGACGACTTCTTCGACAAGGCGGTCGAGGGCTTCGTCATGTTCGCGC
TGAACCAGGGCGAGGTCTGCACCTGCCCCAGCCGCGCCCTGATCCAGGAAAGCGTCTATGACCGCTTCATGGAGAAGGCG
CTGAAGCGCGTCGAGGACATCGTGCAGGGCTCCCCGCTCGATCCCTCCACCATGATCGGCGCGCAGGCCTCCTCCGAGCA
GCTCGACAAGATCCTGTCCTATATCGACATCGGCAAGCAGGAGGGCGCGCAGGTGCTCACCGGCGGCGAGCGCAACAATC
TCGGCGGCGACCTCGCCGGCGGCTATTACGTCAAGCCGACCGTGTTCAAGGGCCACAACCGGATGCGGATCTTCCAGGAA
GAGATCTTCGGCCCGGTGGTCTCGGTGACCACGTTCAAGGACGACGAGGAGGCGCTCTCCATCGCCAATGACACGCTCTA
CGGCTTAGGGGCCGGCGTGTGGACCCGCGACGGCAACCGCGCCTATCGCTTCGGCCGCGCCATCCAGGCGGGCCGCGTCT
GGACCAACTGCTACCACGCCTACCCGGCCCATGCGGCCTTCGGCGGCTACAAGCAGTCCGGCATCGGGCGCGAGACCCAC
AAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTCAGCTACAGCCCGAAGAAGCTCGGCTTCTTCTGA

Protein sequence :
MNKPELSITKQSPFKARYGNFIGGQFVEPVNGRYFDNTSPITGGKICEVARSDKDDIEKALDAAHAAKDAWGKTSAAERA
LILNKVADRMEENLDLLALAETWDNGKPIRETTAADIPLAIDHFRYFAACVRAQEGNLSEIDHDTIAYHFHEPLGVVGQI
IPWNFPILMAVWKLAPALAAGNCVVLKPAEQTPSSVLVLAELVADLLPPGVLNIVNGYGLEAGKPLASNPRIAKIAFTGE
TTTGRLIMQYASQNLIPVTLELGGKSPNIFFGDVVAEDDDFFDKAVEGFVMFALNQGEVCTCPSRALIQESVYDRFMEKA
LKRVEDIVQGSPLDPSTMIGAQASSEQLDKILSYIDIGKQEGAQVLTGGERNNLGGDLAGGYYVKPTVFKGHNRMRIFQE
EIFGPVVSVTTFKDDEEALSIANDTLYGLGAGVWTRDGNRAYRFGRAIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETH
KMMLDHYQQTKNLLVSYSPKKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-143 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 9e-148 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 9e-148 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 9e-148 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-147 63
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_2415 YP_003694329.1 aldehyde dehydrogenase VFG0082 Protein 8e-144 64