Gene Information

Name : Snov_0231 (Snov_0231)
Accession : YP_003692186.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 221025 - 221750 bp
Length : 726 bp
Strand : +
Note : KEGG: bbt:BBta_3436 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
ATGTCCGACGTCAGTCCCCCGCCCGCACCGGTTTTTCACGCCCGTGGCCTTTCCAAGACCTACGTGATGGGCGACGTCGA
GGTCCACGCGCTGCGCAGCGTGGACCTCGATATTTTCGAGCGGGAGTTCGTGGTGCTGCTGGGGCCATCCGGATCCGGCA
AATCGACCCTTCTCAACATTCTTGGCGGCCTTGACGCACCGACCTCGGGAGAGGCGAACTGGCGCGATCACAATCTCGTC
GGCGCCGATGACGCAGAGCTCACCCGGTACCGGCGCGAACATGTTGGGTTCGTGTTCCAGTTCTACAACCTCATTCCAAG
CTTGACCGTCCTTGAGAACGTCGCGCTGGTAACAGAGATCGCCAGCCACCCTCTGAATGCACGCGATGCCCTTGCGCTGG
TCGGTCTAGAGCATCGGCTCGATCACTTTCCGTCCCAGTTGTCGGGTGGCGAGCAGCAACGCGTCGCCGTCGCGCGCGCG
ATCGTCAAATCGCCTGACGTGCTGTTGTGCGACGAGCCAACCGGCGCGCTCGACTACGAGACCGGCAAAGTGGTGCTTGC
CGCCATCGTCCGCGCAAACCAGCAGCTCGGCACCACGACCGTCATCATCACCCACAATGCTGCCATCTCGGGGATGGCTG
ACCGGGTGCTGCGCCTCGGCGGCGGCCGCATTGTCGGCGAAGAGAGGAATCCGCGCCGGCTGTCGCCTGATGAGGTGCAC
TGGTGA

Protein sequence : 
MSDVSPPPAPVFHARGLSKTYVMGDVEVHALRSVDLDIFEREFVVLLGPSGSGKSTLLNILGGLDAPTSGEANWRDHNLV
GADDAELTRYRREHVGFVFQFYNLIPSLTVLENVALVTEIASHPLNARDALALVGLEHRLDHFPSQLSGGEQQRVAVARA
IVKSPDVLLCDEPTGALDYETGKVVLAAIVRANQQLGTTTVIITHNAAISGMADRVLRLGGGRIVGEERNPRRLSPDEVH
W

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_0231 YP_003692186.1 ABC transporter NC_012469.1.7685735. Protein 5e-48 54
Snov_0231 YP_003692186.1 ABC transporter NC_008702.1.4606598. Protein 2e-30 45
Snov_0231 YP_003692186.1 ABC transporter CP001581.1.gene598.p Protein 3e-36 41
Snov_0231 YP_003692186.1 ABC transporter CP001581.1.gene798.p Protein 2e-33 41
Snov_0231 YP_003692186.1 ABC transporter NC_012469.1.7686878. Protein 6e-35 41