Gene Information

Name : Snov_2051 (Snov_2051)
Accession : YP_003693968.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Virulence
Product : betaine-aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 2159019 - 2160560 bp
Length : 1542 bp
Strand : -
Note : KEGG: bja:bll7607 aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase

DNA sequence :
ATGGCATGGCTCTTGCGGTCCCAAGGCATCCCTTTCGTTTCCGAAAGTAGTGCCATGACCATCAACGTGAATCCGATCGC
CGACATCATCGCGCCGCTGCCCAAGCAGCTCCTGATCGACGGCAAGTTCGTGCCCTCGCTCTCGGGCAAAACCTTCAAGA
CCTTCAACCCGGCGACGGGGGAGGTGCTGGCCGAGGTCTCCGAGGGCGGCGCGGCCGATATCGACCTCGCCGTGGCGGCG
GCGCGGCGGGCCTTCACCGGCCCGTGGAGCCGCTTCACCCCGTTCCAGCGCCAGCAGTGCCTGCTGCGCTTCGCCGATCT
GGTGGAGAAGCACTTCGACACGCTGGCGCATATCGACGTGCTCGACATGGGCGCGCCTATCACCTCCATGTATGCGCGCC
GCCAGCGGGCGCTCGGCCTGCCGCGCTTCTATGCCGGCATGTGCACCGTCATCGCCGGCGGCACGCTGCCGAACTCCATG
CCGGGCGAGGTGTTCACCTACACGCTGAAGGAGCCGGTCGGCGTGGTCGGCGCCATCACGCCGTGGAACGCGCCGCTCAC
CTCGACCATCTGGAAGATCGGCCCGGTGCTCGCCACCGGCTGCACCATGGTGCTGAAGCCCGCCGAGGACGCCCCGCTCA
CCGCGCTGCGGCTCGGCGAGCTGCTGCTGGAGGCCGGCGTGCCGGAAGGCGTGGTCAACATCGTGCCCGGCTTCGGCCAC
ATCGCCGGCGACGCGCTGGCCCGGCACATGGATGTCGACAAGGTCGCCTTCACCGGCTCGGACGTCACCGGCCGCAAGAT
CATCGACGCCTCGAAGGGCAATCTGAAGCGGGTGACGCTGGAGCTCGGCGGCAAGTCGCCGGACGTCATCTTCGCCGATT
GCGACATGGACGCCGCCGTCGCCGGCGCCGGCATGGGCGTGTTCGCCAATAGCGGGCAGATCTGCTGCGCCGGCACGCGG
CTGCTGGTCCAGCGGCCGATCTACGAGGAGTTCGTCGCCCGCGTCAGCGACTATGCGCGATCGCTCAAGGTCGGCAACGG
CCTCGATCCGGCGACGCAGATCGGGCCGGTGGTCAACGCCAAGCAGCTCGACCGCGTCAGCGGCTATATGGAGATCGGCT
TGGGCGAGGGTGTCACCGCCGCCACCGGCGGCAAGCGCCTGACCGAGGGCGCGCTGAAGGACGGCTATTTCTTCGAGCCG
ACCGTGCTCAGCGGCGTGACCAACGACATGCGCATCGCGCGGGAGGAAATCTTCGGCCCGGTGGCCGCGGCCATCCCCTT
CGACACGCTGGAGGAAGCCGCCGCCATCGCCAACGACACCGTGTTCGGCCTCGGCGGCGGCGTGTGGACGACCAACGTCT
CCACCGCGCACCGCATGGCGAAGGCGATCCGCGCCGGCACGGTGTGGATCAACACCTATGGCGGGCTCGATCCGGTCGTG
CCCTTCGGCGGCTACAAGACCAGCGGCTATGGCCGCGAGTCCGGCGTCGAGCATCTCGACGCCTATCTCGAGACCAAGTC
GGTGGTGCTGAAGCTGGGCTGA

Protein sequence :
MAWLLRSQGIPFVSESSAMTINVNPIADIIAPLPKQLLIDGKFVPSLSGKTFKTFNPATGEVLAEVSEGGAADIDLAVAA
ARRAFTGPWSRFTPFQRQQCLLRFADLVEKHFDTLAHIDVLDMGAPITSMYARRQRALGLPRFYAGMCTVIAGGTLPNSM
PGEVFTYTLKEPVGVVGAITPWNAPLTSTIWKIGPVLATGCTMVLKPAEDAPLTALRLGELLLEAGVPEGVVNIVPGFGH
IAGDALARHMDVDKVAFTGSDVTGRKIIDASKGNLKRVTLELGGKSPDVIFADCDMDAAVAGAGMGVFANSGQICCAGTR
LLVQRPIYEEFVARVSDYARSLKVGNGLDPATQIGPVVNAKQLDRVSGYMEIGLGEGVTAATGGKRLTEGALKDGYFFEP
TVLSGVTNDMRIAREEIFGPVAAAIPFDTLEEAAAIANDTVFGLGGGVWTTNVSTAHRMAKAIRAGTVWINTYGGLDPVV
PFGGYKTSGYGRESGVEHLDAYLETKSVVLKLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-76 48
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-69 44
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-69 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 9e-70 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 9e-70 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 9e-70 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_2051 YP_003693968.1 betaine-aldehyde dehydrogenase VFG0082 Protein 1e-69 42