Gene Information

Name : Snov_1956 (Snov_1956)
Accession : YP_003693875.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Unknown
Product : major capsid protein HK97
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2048113 - 2049324 bp
Length : 1212 bp
Strand : -
Note : PFAM: major capsid protein HK97; KEGG: oca:OCAR_6143 phage capsid family

DNA sequence :
ATGCTACGGCGCCGGGATGGCGCGGCATTCCCTCACAACCTGACTTCAATCAACTGGCGCCTGTGGCGCCGGAAAGGACT
ATACGTGTCTGATCTTCTTGCCGCCAAAATCACTGAACTTGGCGATGCCTTCAACAAAAAGGCCGGCAATCTCGCCACCC
GCCTCTCTGAGCTTGAGAAGCGGTCCGCCACTGAGCGCGACAACCCGGACGCCACCGACGTCGCTGGCGCCGATGCGCTT
GAGCGCGCCATTCTCAACGCACCGTCGATCCGCGACCTCTCGTCGACCTTCCGCGGCAAAGCGGTGATCAAGCTTGCTGC
CGAGAACGCCGCCATCACCTCTGACAACAGCACGGTCGGTGCCGGTCGTTCGGCGGGCACGTCGCTGGTTCCGGGGCAGC
GGGTCGGCGGCATCTACGGGCCGTACCGCCGAGAGCTCGTTCTGCGCGACGTCATCGGCAGCGCCCGCACCACGTCCTCG
AGCGTCGAATACGTCCGCGAAACCGGCTTCACGAATAATGCCCGGCCGGTGACCGAGGGCACGACGAAGCCGACTTCGGA
CCTGACCTTCAACATGTATTCGGCGCCCGTTCGGACGCTGGCGCACATTTTCAAGGTGTCGAGGCAGATGCTTGACGACG
GCCCAGCGCTTGCTGCGTACATCGGCCGCCGGGGCACCTACGGGCTCAAGCAGGTCGAGGAAAACCAGATCCTGTTCGGC
AATGGCACGGGCCAGAACCTGAACGGTCTGGTTCCGCAGGCAACGGCCTTCGCCCCGGCGTTCATGTCGGCTGCGGAAAC
GGCATTCGACAGGATCAACCAGGCCATCAGCCAGGCCGAAGACGCCGAAGTGCCCGTCAATGCGATCGTGCTGAATAAGC
GGGACTGGCGAAAGATGCTCGGCACCAAGGCCGGCGACGAGCGGTATATCTCCGGCCAGTCTCCGTTTGGCCTGCAGGAA
CCGCGACTTTGGAATCTTCCGGTGGTGGCGACCAATGCCATGCCGGTGGGAGAATTCCTTGTCGGCGCGTTCGGCGAGGC
TGCCACTATCTTCGATCGACTTGATGTTGAGGTTGCGATTTCGACTGAGAACACCGACGACTTCGAGAAGAACATGGCGA
CTATTAGGGTCGAGGAGCGCCTAGCCTTCGCGGTGTTCCGTCCGGAAGCCTTCGTCACCGGCGACCTCGACAGCGTCGTG
ACCTCGGGCTGA

Protein sequence :
MLRRRDGAAFPHNLTSINWRLWRRKGLYVSDLLAAKITELGDAFNKKAGNLATRLSELEKRSATERDNPDATDVAGADAL
ERAILNAPSIRDLSSTFRGKAVIKLAAENAAITSDNSTVGAGRSAGTSLVPGQRVGGIYGPYRRELVLRDVIGSARTTSS
SVEYVRETGFTNNARPVTEGTTKPTSDLTFNMYSAPVRTLAHIFKVSRQMLDDGPALAAYIGRRGTYGLKQVEENQILFG
NGTGQNLNGLVPQATAFAPAFMSAAETAFDRINQAISQAEDAEVPVNAIVLNKRDWRKMLGTKAGDERYISGQSPFGLQE
PRLWNLPVVATNAMPVGEFLVGAFGEAATIFDRLDVEVAISTENTDDFEKNMATIRVEERLAFAVFRPEAFVTGDLDSVV
TSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01028 YP_001437133.1 hypothetical protein Not tested Not named Protein 5e-50 41