Gene Information

Name : Snov_1928 (Snov_1928)
Accession : YP_003693850.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2017204 - 2018475 bp
Length : 1272 bp
Strand : +
Note : PFAM: integrase family protein; KEGG: mlo:mll6432 symbiosis island integrase

DNA sequence :
ATGGCCTTGTCAGATGCAGCGTGCCGGACGGCCAAAGGCCGGGAAGGCGAATACAAACTTTCCGACGGTGGCGGCCTCTA
TCTTTTCGTGAAGCCCAACGGCGCCCGGGTCTGGCAGCAGGCCTACAGATTCGCGGGCAAACAGAAGAAACTCACCCATG
GGCCCTATCCGCTCATTTCGCTGGCAGATGCGCGGCGGCTTCGGGACGAGGCCAAGAGGGTGTTGGCCTCGGGGGTAGAC
CCCGGAGCCAACAAACGAGCCAACAAGGCCGCCGTCGCGGCGTCTGCCGCAGCAGCAACAAGCACCTTCGGGGTCATTGC
GACGGAGTTCATCGACAAGATGACCAAGGAAGGGCGAGCCGAGGCCACCCTCTTGAAAGCGCACTGGCTGCTGGAGGAAA
TCGCAGCCCCTCTTCGCAACCGCCCCATCGCCGAGATCACACCGCCAGAGATCCTCGCCGTCCTGCGGGCGGTGGAGGTC
AAAGGTCACTACGAGACCGCGCGCCGCTCCCGCAGCATCATCGGTCAGGTCTTCCGTTATGCGATCGCAACCAGCCGCGC
CGAACGGGATGTGACGGCCGATCTGCGAGGCGCACTTATCGCACCCACGACCAAGCACCGCGCCGCCATCACACGCCCGA
AGCGGCTTGGCGAGCTTATGGCGGCCATCTATGGCTGGACGAAGGGTCAGGAGACGACGGTCGCAGGCCTGAAGCTGCTC
GCCCTGCTTGCGCTCCGTCCCGGCGAACTCCGCGCCGCCACGTGGGACGAGATTGACCTTGAAGCGGGGGTCTGGATCGT
TCCAGCCAGCCGAACCAAGATGCGCCGACCACACCGCACGCCCCTGCCCTTACAGGCCGTAGCCACCTTGCAGGAACTGC
GGGACACCACCCGCAGCAGGATCAGTACCTTCGTGTTTCCAGCGACAGTATCGGTGAGGAAGCCGATGAGCGAGAACACT
CTGAACTTCGCTCTACGTCGCCTGGATATAGGGGCGGAGGAGATGACCGCGCACGGCTTTCGGGCGGCGTTTGCCACGCT
CGCCAATGAGAGCCGACGCTGGCATCCCGATGCGATCGAGCGGCAACTCGCCCATGTTGAAGGCAACAATGTACGCCGGG
CTTATACCCGCGGCGAGCATTGGGACGAACGTGTGCTGATGATGCAGTGGTGGGCAGACGAACTGGATCGGCTTCGAGAT
GCGGCTATCATGGAGGCCCGCCCCCAAGCCCATCCCCAGCGCAGGCCCGCAAAGTTTCAATCGGCTCGTTAG

Protein sequence :
MALSDAACRTAKGREGEYKLSDGGGLYLFVKPNGARVWQQAYRFAGKQKKLTHGPYPLISLADARRLRDEAKRVLASGVD
PGANKRANKAAVAASAAAATSTFGVIATEFIDKMTKEGRAEATLLKAHWLLEEIAAPLRNRPIAEITPPEILAVLRAVEV
KGHYETARRSRSIIGQVFRYAIATSRAERDVTADLRGALIAPTTKHRAAITRPKRLGELMAAIYGWTKGQETTVAGLKLL
ALLALRPGELRAATWDEIDLEAGVWIVPASRTKMRRPHRTPLPLQAVATLQELRDTTRSRISTFVFPATVSVRKPMSENT
LNFALRRLDIGAEEMTAHGFRAAFATLANESRRWHPDAIERQLAHVEGNNVRRAYTRGEHWDERVLMMQWWADELDRLRD
AAIMEARPQAHPQRRPAKFQSAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 1e-53 41
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 1e-53 41