Gene Information

Name : Snov_0160 (Snov_0160)
Accession : YP_003692115.1
Strain : Starkeya novella DSM 506
Genome accession: NC_014217
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 157031 - 157756 bp
Length : 726 bp
Strand : -
Note : KEGG: pae:PA1256 amino acid ABC transporter ATP binding protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
ATGTCCATTCTGATCGACGACGTCCACAAATCCTTCGGTTCGCTCGAAGTGATCAAGGGCGTCACCATGACTGTCGAGAA
GGGCGAGGTGGTCTCCGTCATCGGCGGCTCCGGCTCGGGCAAGTCGACCCTGCTCATGTGCATCAACGGGCTGGAGCCGA
TCAATTCGGGGCGCATCCTCGTCGACGGCACCGATGTCCACGCCCGCGGCACCGACCTCAACAAGCTGCGCCGCAAGATC
GGCATCGTCTTCCAGCAGTGGAACGCCTTCCCCCACCTCACCGTGCTGGAGAACGTGATGCTCGCCCCGCGCAAGGTGCT
GGGCAAGTCGAAGGCCGAGGCGCAGGCGGTCGCGGTGGAGAAGCTCACCCATGTCGGCCTGGCCGAGAAGCTGAACGTCT
ATCCGTCCAAGCTCTCCGGCGGCCAGCAGCAGCGCATGGCCATCGCCCGGGCGCTCGCCATGTCGCCGGACTACATGCTG
TTCGACGAAGTCACCTCGGCTCTCGACCCGCAGCTCGTCGGCGAGGTGCTCGACACCATGCGCCTGCTCTCGAAGGAGGG
CATGACCATGATCGTGGTCACTCACGAGATCGCCTTCGCGCGCGAGGTGTCCGACCGCGTCGCCTTCTTCCACAAGGGCC
GAATCCACGAGATCGGCCCGCCTTCGCAGGTGATCGGCAATCCGCAGCAGCCGGAAACCGTCGCCTTCCTCAAATCCGTC
CTCTGA

Protein sequence : 
MSILIDDVHKSFGSLEVIKGVTMTVEKGEVVSVIGGSGSGKSTLLMCINGLEPINSGRILVDGTDVHARGTDLNKLRRKI
GIVFQQWNAFPHLTVLENVMLAPRKVLGKSKAEAQAVAVEKLTHVGLAEKLNVYPSKLSGGQQQRMAIARALAMSPDYML
FDEVTSALDPQLVGEVLDTMRLLSKEGMTMIVVTHEIAFAREVSDRVAFFHKGRIHEIGPPSQVIGNPQQPETVAFLKSV
L

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-18 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Snov_0160 YP_003692115.1 ABC transporter NC_012469.1.7686878. Protein 4e-16 42